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Information for unigene UN36597

FASTA Sequence
Unigene ID: UN36597Length: 754 SSR 
GGGTAGTAGGTGGTGGTGTCAATCATCTTCTTCTTCTTCTAGGGTTCTTATTTAGCTATGAAGCTCCTCTGCATCTCCCCTTCTTC
CCCGCCAAAATGCATCTTTTAATTCGCGAAAACTAGGGTTTTTTTGTCCCTCTTTGATTTTATCGCAATTTTTCTGGGTGGGGTTT
GTAACATTTTGGGGGAGATGAAGAAGATCTTCGGAGGTCCAGGAACTGTGTGTGGTCTGTTACTGAGAATCGGACAATGTGCTTCT
TCTGCTGCTTCTATCGTCTTTATGGTCTCTGCCACCGACTTCTCTGGTCGCACTGCTTTCTGCTACTTGATTGCTTCGATGGGTCT
TCAATTGCTGTGGAGCTTTGCCCTCGCGTGTCTTGATGTTTATGCTCTAAGGACCAAGAAAGATCTCCAAAACCCAATCTTGGTTA
GCTTATTCGTCGTTGGTGATTGGGTGACTGCAATGTTATCTCTTGCAGCTGCGTGTTCATCGGCTGGAGTTGTGGTCTTATATGCC
AAAGATCTCAAGTATTGTGATATCCACGCCCAGCTTTCATGTCTTAGGTATGAAGTCGCCGTGGCGCTTTCTTTCGTCACTTGGGT
TCAGATTGTCCTTTCTTCTCATGTCACGTTTTGGATTTTAGCCTCGGTTTAGTTTCTTTAAATGTTGCAATTGACTTTGTTAACAC
AATGACATTTTGCTTCAAATCAAATTCATCAATTTTTCTTAAGCTTATTTATATATCACTTTAACC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002877943 hypothetical protein ARALYDRAFT_485778 [Arabidopsis lyrata subsp. lyrata]6839e-070
NP_566990 uncharacterized protein [Arabidopsis thaliana]6775e-069
XP_002309085 predicted protein [Populus trichocarpa]6192e-062
XP_002529873 conserved hypothetical protein [Ricinus communis]5871e-058
ACU14250 unknown [Glycine max]5762e-057

Swiss-Prot top hits (Blast detail)Scoree value
Q945M8 UPF0497 membrane protein At3g538506772e-070
Q9LZM5 UPF0497 membrane protein At5g020605259e-053
Q8L7R5 UPF0497 membrane protein At3g232004254e-041
Q9SKN3 UPF0497 membrane protein At2g283703538e-033
Q6NPF8 UPF0497 membrane protein At2g372002991e-026

TrEMBL top hits (Blast detail)Scoree value
B9HC42 Predicted protein6192e-062
B9SV54 Putative uncharacterized protein5879e-059
C6SYC7 Putative uncharacterized protein5762e-057
B9HT63 Predicted protein5376e-053
B8BD96 Putative uncharacterized protein5035e-049

Arabidopsis top hits (Blast detail)Scoree value
AT3G53850.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702); BEST Arabidopsis thaliana protein match is: integral membrane protein, putative (TAIR:AT5G02060.1); Has 100 Blast hits to 100 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 100; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).6782e-071
AT5G02060.1 integral membrane protein, putative5259e-054
AT3G23200.1 unknown protein4291e-042
AT2G28370.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702); BEST Arabidopsis thaliana protein match is: integral membrane protein, putative (TAIR:AT2G37200.1); Has 100 Blast hits to 100 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 100; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).3573e-034
AT2G37200.1 integral membrane protein, putative3018e-028

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  100%

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