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Information for unigene UN36622
| FASTA Sequence |
| Unigene ID: UN36622 | Length: 946 |
SSR | | GGGGTATCGCCTTTCTCATTACACCAACGCTGAACACACTTCCTATGAGCATACTAGACGACACAATAGAAAAAAGACAACAACTC
AGTTTTCAGGGAGAATATACAGACAAAAAAAAACAGAAGAAGACTTGACCTTCAAGCTGCCGCTGCAAGAACACGGAGACTCGAGG
TTCTTAACAGAATCCTCCTCTTGGCAAATACGGCATTCAACTGATTGTTGGATAAGCGGCTCCTCCTCTTCATCGCTTTCTTCCTT
ATCATCTACAGGTTTAGTAGTGGTGGTGTCTTGAGCTCTGGAACTTTCTCCAGAAGATTGATTGGATCCTTTATCTGAATTAAGGT
GATCAGATGTAACGAGACGGTCGGTACATGAACTCAGATGATCAGACATCTCTCTCTCAATGCTGCAAAAAAAAGAAAAAAACGTT
GACCTGTTTTTTTTTTTAATTTTAAAAAACTCCAATTATGACAAATGTTCAGGATTCAAATCTCAACCATGAACACGAAGGAGAGA
GAGAGATACGATTCGATAACAATTCAGATAGCGAAACCCGAAAAATCGCAGAAATCAAAATTCTCAGATCGGTGAAAAAAAGAGAT
TATTGTTTACCTGATAGAAAATACTCTGAATCGTTGATTTCTTGAAGGCAGAGAGTCTTTTTTTTTTGAGCAACCAGAGACAGTCT
TTGAAACGAAACTTTTGGACAAATGTGTGTTGTTCTTGTGTTGATGATCGGTCTGAAAGAATTTTCAGATAAGTATATTTATTAAA
TGTCTCTCGAAGCGCGTGTATACTTTATCTATAAGTTTTCAAAACACAAACCGGAGCTGTGGATGTTGACGGTTTGACACGGTGAC
TTCCGTTAAAAGGCTTTTAGACGGAATAAGCTGTGGAATGTTGGCAGTTAAACAAAAATGGTGCATAATAAAATGTAAATAGTAGG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002875846 zinc finger family protein [Arabidopsis lyrata subsp. lyrata] | 253 | 1e-019 |
| NP_850668 RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] | 239 | 4e-018 |
| NP_850667 RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] | 239 | 4e-018 |
| NP_190339 RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] | 239 | 4e-018 |
| XP_002514758 membrane associated ring finger 1,8, putative [Ricinus communis] | 200 | 1e-013 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A9CEI2 Uncharacterized protein At3g47550.2 | 239 | 3e-018 |
| Q3E6V0 At3g47550 | 239 | 3e-018 |
| Q9SN83 Putative uncharacterized protein At3g47550 | 239 | 3e-018 |
| D2KC47 RING-type E3 ubiquitin ligase | 233 | 1e-017 |
| B9RLY9 Membrane associated ring finger 1,8, putative | 200 | 1e-013 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G47550.3 zinc finger (C3HC4-type RING finger) family protein | 239 | 2e-020 |
| AT3G47550.2 zinc finger (C3HC4-type RING finger) family protein | 239 | 2e-020 |
| AT3G47550.1 zinc finger (C3HC4-type RING finger) family protein | 239 | 2e-020 |
| AT3G47550.6 zinc finger (C3HC4-type RING finger) family protein | 239 | 2e-020 |
| AT5G62460.1 zinc finger (C3HC4-type RING finger) family protein | 188 | 1e-014 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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