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Information for unigene UN36701
| FASTA Sequence |
| Unigene ID: UN36701 | Length: 583 |
SSR | | GGAGGGCTTTAACATTGAGAAAGCGAAAAGGGTTTAGATCCAGAAGCAGCAGCAGCAGCGAAGGTCTTTCAACTAACTGTAGCATG
GCGACAACTACTGGACTTGAGTCTCTTGTCGATCAGATCATTTCGGTAATCACCAATGATGGACGCAACATTGTGGGACTTCTCAA
AGGTTTTGACCAGGCTACTAATATAATCCTCGATGAATCTCATGAACGCGTCTTCTCCACCAAGGAAGGAGTACAACAACATGTGT
TGGGTTTGTACATTATCAGAGGCGACAACATAGGTGTTATTGGGGAGCTGGACGAGGAGCTTGATGCTAGTCTGGATTTTTCCAAA
CTGAGGGCTCATCCTTTGAAACCCGTCGTGCATTGATTGGAAAAAAATAGTTATGTTGAAGTACTAAACAAAGAGAAAGATTGCAA
ACAGTTTGGATTAGTTTGTCTTTGGAGTTGTGTGCTTTGTCTATCCTAAGGTTCTTTCTATGTCAAACGCTTTTGCCCTTAAAGAT
CGTTGTAATTCCAAATCGTAATAGACTGAATCATTTGCGATCCTAGTGAGAGATGAATTTTATCTTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_176747 U6 snRNA-associated Sm-like protein LSm8 [Arabidopsis thaliana] | 480 | 2e-046 |
| XP_002888445 hypothetical protein ARALYDRAFT_315605 [Arabidopsis lyrata subsp. lyrata] | 469 | 3e-045 |
| XP_002299990 predicted protein [Populus trichocarpa] | 434 | 4e-041 |
| XP_002263175 PREDICTED: hypothetical protein [Vitis vinifera] | 432 | 6e-041 |
| ACU13705 unknown [Glycine max] | 431 | 8e-041 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q3ZCE0 N-alpha-acetyltransferase 38, NatC auxiliary subunit | 321 | 3e-029 |
| O95777 N-alpha-acetyltransferase 38, NatC auxiliary subunit | 321 | 3e-029 |
| Q6ZWM4 N-alpha-acetyltransferase 38, NatC auxiliary subunit | 321 | 3e-029 |
| Q5RCP3 N-alpha-acetyltransferase 38, NatC auxiliary subunit | 321 | 3e-029 |
| Q1ZXD5 N-alpha-acetyltransferase 38, NatC auxiliary subunit | 239 | 8e-020 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8VYI0 At1g65700/F1E22_3 | 480 | 1e-046 |
| A9PCH9 Predicted protein | 434 | 3e-041 |
| C6SWT2 Putative uncharacterized protein | 431 | 6e-041 |
| Q9SHY4 F1E22.8 | 429 | 1e-040 |
| B9SCZ8 Lsm1, putative | 416 | 3e-039 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G65700.1 small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative | 481 | 7e-049 |
| AT1G65700.2 small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative | 481 | 7e-049 |
| AT1G19120.1 small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative | 159 | 2e-011 |
| AT3G14080.1 small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative | 149 | 2e-010 |
| AT3G14080.2 small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative | 149 | 2e-010 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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