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Information for unigene UN36778

FASTA Sequence
Unigene ID: UN36778Length: 1096 SSR 
GGGTTCTCAAAGAAAGAGGACACATCTTGCTATTTCCTTTTCATTACGTTACCTTTCCCTTCTAGTCGCGACCCATAAGAGAATGC
GAACCAAGAAAATAACAAAAGTAGAGACAAGCCTTTTGATTTTCTGCACAAAAATTTTGGAAAGATATATCGTTTTACAAGTTTGT
AGCCCGGAATTATACATCTTCGAAATCTATATGATTCCGTTCCTTTGGTAATAGGAACCCTAACTTCTCCCATAACAATGTATGCA
TTAGCAAGTTGAAGCTGACCTCATCGATGAAGGGTCTATTAAAAGGATTGAGGTATATTGCTCGCATCTTCGAGGATAATAAGGAA
CCAGAGATGCAGATTGGAAAACCGACCGATGTGAAACATGTTGCTCATATAGGATGGGAAGGGCCCTCTGCTACGACCCCAAGCTG
GATGCATGATTATAAGTCTCCAACGGCTGAGGCAAAAGGAAGTTCCAACAAGAAACCCAGGGAGAAGCAAAATAACAAGGGGAGGC
GTAAAGCATCCACAGGCACAAACAACTCACCTGCAGAGTCTCCATCAAGGGTAGGAGGTTCAACAAGGCCATCAAGACGAAGCACG
GGTAAACAGAGAGAACAGAGCACGGGTTCAGGGTCGGAGTCAGGTTCAGGGTTAGACTTACCTCAACAGAATGATCAGCCTGTGGG
ACAGAAACAAACGCGGCAGAAGAAGTCAAAAGGAACAAAAGGAGGAGGAGGAGGATCGTCTGTTGGGCCTGCAAAGACAAAAGAAA
CAGATATATCCGTGCGTGCGGCTATTCCTTGTGTGGGAGGTCTTGGAAGTTCTACAGGAAGATGAGAGATGAGAAAATGACAGTTT
TTTTCTTCAAGTTTAGACTAGAGTGGTGGTTTTGTTTTTCTTCTCATAATCTACACACTTTTGTCTTTTCTCTCCATCTTTTTTGA
GATGTCTTTGCACAACTAGACCAGCTTTTTATCAGACGAGAGAGAGAGATAGACCTCTATGAGATTTCGATTGTGTTGTCGCATTA
TGATTTTTTTTTTTGCTCAGTTAAACGCAACCACAGCTTTTAATATATTAAACAAAATTTATAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002883428 hypothetical protein ARALYDRAFT_319056 [Arabidopsis lyrata subsp. lyrata]7234e-074
NP_188980 ROP-interactive CRIB motif-containing protein 5 [Arabidopsis thaliana]6841e-069
BAB02282 unnamed protein product [Arabidopsis thaliana]6643e-067
XP_002314486 predicted protein [Populus trichocarpa]2871e-023
NP_179633 ROP-interactive CRIB motif-containing protein 6 [Arabidopsis thaliana]2754e-022

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9LW58 Gb|AAB80663.16642e-067
B9HSG6 Predicted protein2871e-023
A0MEN4 Putative uncharacterized protein (Fragment)2753e-022
Q1PF35 p21-rho-binding domain-containing protein2753e-022
Q9SIM6 Putative uncharacterized protein At2g204302701e-021

Arabidopsis top hits (Blast detail)Scoree value
AT3G23380.1 RIC5 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 5); protein binding6854e-072
AT2G20430.1 RIC6 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 6)2751e-024
AT2G33460.1 RIC1 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 1); protein binding2714e-024
AT4G28556.1 RIC72203e-018
AT1G04450.1 RIC3 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 3); protein binding2088e-017

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  100%

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