Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN36822

FASTA Sequence
Unigene ID: UN36822Length: 969 SSR 
GTAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTCGCATCACACTGCTTAATTTGATCAGATCGTAAGA
GAAGATGGGAGACGCCGCAAGTCACCTGGAGAAGATGGGTAGAGAACTCAAGTGCCCTATTTGTTTGAGTCTATTTAATTCTGCAG
TTTCGCTTACCTGCAACCATGTCTTCTGCAATGCATGTATAGTGAAATCCATGAAAGTTGATGCTACTTGTCCTGTCTGTAAAATC
CCTTTCCATCGTAGAGAGATTCGAGGTGCTCCTCATATGGATAGCTTGGTGAGCATTTACAAGAACATGGAAGTTTCTTCTGGTGT
CCACTTGTTTGTTACCCAGAAGACTAAACTATCATCACCACCAGAAAAAGAAAAGCATGTGGGAGATGCGTCAACAGAAAAGGAAA
ATAGAAAGAAACGTCAGGGATCTAGTAAAGGCCCAACATCCAAGAGGAGAGGTTCTAAAAACCCCAAGGAAACTGATGCAGATTCC
TCTGGTCAGAGAGAGAGAGATCAATCAACCCTCGCCAATCTCAGATTAGCTGTTTTGTTTTCTCTCTAGATGGATTCTATATCAAA
GCTTTTAGATCCAGAGAAACATCATGCCGTTACCGAAGCCTTGAGCTCGTGCGGTTTAACGCCGGACAACAGTCACGTGCTTTACT
CGGCACTGTCTACATCTTCGACAGCTCCGTAGCTAGAAGCTCGTTTCTGAGTTCAAGCTCCATCAGTTTCATCGATTCCACAAGCC
GTTTGTAGAGATGTCTTTAACTCGCGTGCCTTCAATAATCCCCGAAGAGCCACCTCGGACGTTTGTTTCTTCTCCACCGCAAAGAT
AAGTTCTTTTATTAAACCTTTTCTTTTGGGCAACTGAAATTGATTAAAGGAAAGAGAGTTTAGCAAACTATAGCTGTGGTTTAAAT
TATTAATCAGAGATCGTTGAGCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
CAA17526 putative protein (fragment) [Arabidopsis thaliana]5487e-054
CAB45902 putative protein (fragment) [Arabidopsis thaliana]5487e-054
NP_193839 protein BREAST CANCER SUSCEPTIBILITY 1-like protein [Arabidopsis thaliana]5397e-053
CBI30968 unnamed protein product [Vitis vinifera]4196e-039
XP_002300335 predicted protein [Populus trichocarpa]3963e-036

Swiss-Prot top hits (Blast detail)Scoree value
Q8RXD4 Protein BREAST CANCER SUSCEPTIBILITY 1 homolog5393e-054
P15533 Tripartite motif-containing protein 301479e-009
Q5D7I6 Tripartite motif-containing protein 51433e-008
Q5BN31 Tripartite motif-containing protein 51433e-008
Q8IYM9 E3 ubiquitin-protein ligase TRIM221406e-008

TrEMBL top hits (Blast detail)Scoree value
O49549 Putative uncharacterized protein F7J7.10 (Fragment)5485e-054
B9GJF8 Predicted protein3962e-036
B9SYJ0 Brca1 associated ring domain, putative3801e-034
C5Z0U2 Putative uncharacterized protein Sb09g0251503674e-033
Q0DGU0 Os05g0512000 protein3442e-030

Arabidopsis top hits (Blast detail)Scoree value
AT4G21070.1 ATBRCA1; ubiquitin-protein ligase5393e-055
AT1G04020.1 BARD1 (BREAST CANCER ASSOCIATED RING 1); DNA binding / transcription coactivator2321e-019
AT1G04020.2 BARD1 (BREAST CANCER ASSOCIATED RING 1); DNA binding / transcription coactivator2312e-019
AT3G07200.1 zinc finger (C3HC4-type RING finger) family protein1201e-006
AT3G07200.2 zinc finger (C3HC4-type RING finger) family protein1201e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  100%

Unigene MembersMember information