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Information for unigene UN36979

FASTA Sequence
Unigene ID: UN36979Length: 1131 SSR 
GGGTCTCGACTGAATCCAAAGGTTTAACCTTTGCTTGAAGCTCGTGAAACCCTTCACCACCGAGATGCCAATTTAGAGACTACATA
GAGAGAGAGAGAGAGAGAGAGAGATAATGGTGAAGGCAGCGGGAAAGCAGAGTTGCGGGCGGCTTGTGTTCGCTTCATTCCTCGCT
CTTCTAGCCTTTGTACTCATCGCCGACTTCCTCTGGGCTTCTTCTCATCGCTTCTCCTCCTCCCATTGAGAAATATAATAGTAATA
AGAAGAAGAAGAAGGACGATAATGGTAGAGAAAGGAAGCTTTCTGCAACGTTTCAAGACCTGCCTGCTCCTCAGCTACATTGGGAG
AAGATGTCAGCTGCACCTGTGCCTCGTCTTGACGGAGCTGCTATTCAGATCAGTAACTTTCTTTACGTCTTTGCTGGTTACGCCAA
CATTAATCTCGTACGAAGAGATCTTATTAGATCAGTAGCATTCCTCTGTTTCGGCGTCCAATGATGAGTTGATGATATGTTTCAAT
AATCTTCAAATACTCACGTCGTTTGGAGGTGGTATTCAGTGATGTTTACATGCTGGATGAGGAAATGAAGTGGAAAGTTATGCCAC
CGATGCCTAAACCGGATTCACATATTGAATTTGCTTGGAAAGTAGTTAACAACTCCATTGTGATCGTTGGAGGGACAACAGAGAAG
CACCCTGAAACCAAGAAGATGGTTCTCGTTGGCGAAATCTTCCAGTTTAACCTGAATACAATGAAATGGTATGTGATTGGAAAGTT
GCCGTACCGTGTGAAGACTACGCTGGTTGGTTATTGGGACGGGCAGTTATACTTCACATCAGGGCAACGAGACAAAGGCCCTGATG
ATCCTGGACCGCGCAAGGTAATTGCAGAGATGTGGAGAACCAAACTGATACTGAATCCATAATCATGTAAGAGAAAAAAAATATCT
ATCTCCCTCTTTAGTAATGCAAAGTCCCAACAGATTTTGAAGTTCTTTGAGCCTAACTCATCCCACTCCACAAAACAATTGCTCTA
TATATATCTTCTATATTGATGGGGAATTTGTATATTGTAAACTAAATACACAAACTATGTAGAACGTTTCAATTTTTTCAACACAT
TTCTTTGTGTGCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAG52629 unknown protein; 27363-23366 [Arabidopsis thaliana]7012e-071
NP_175565 kelch-like motif-containing protein [Arabidopsis thaliana]7012e-071
XP_002883284 hypothetical protein ARALYDRAFT_318850 [Arabidopsis lyrata subsp. lyrata]6966e-071
XP_002265018 PREDICTED: hypothetical protein [Vitis vinifera]5991e-059
XP_002316438 predicted protein [Populus trichocarpa]5935e-059

Swiss-Prot top hits (Blast detail)Scoree value
Q9LK31 Kelch repeat-containing protein At3g272205171e-051

TrEMBL top hits (Blast detail)Scoree value
Q84VX7 At1g515407011e-071
Q9C8K6 Putative uncharacterized protein F5D21.247011e-071
B9HV26 Predicted protein5934e-059
B9S7E9 Putative uncharacterized protein5891e-058
B9HK43 Predicted protein5844e-058

Arabidopsis top hits (Blast detail)Scoree value
AT1G51540.1 INVOLVED IN: biological_process unknown; LOCATED IN: Golgi apparatus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch repeat type 2 (InterPro:IPR011498), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: kelch repeat-containing protein (TAIR:AT3G27220.1); Has 1571 Blast hits to 1365 proteins in 151 species: Archae - 11; Bacteria - 200; Metazoa - 1128; Fungi - 24; Plants - 53; Viruses - 41; Other Eukaryotes - 114 (source: NCBI BLink).7024e-074
AT3G27220.1 kelch repeat-containing protein5171e-052

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  100%

Unigene MembersMember information