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Information for unigene UN37007
| FASTA Sequence |
| Unigene ID: UN37007 | Length: 855 |
SSR | | GGATGAGACATGTGTTGGACCCAGGTCTCTTTCTCTCTCTCTTTGCAGGGTTCACCATCGTCGTCACTGCTAATCTCATCTCTGTC
CATGGTTTGATTCGTCATATGTCTAGGAAGAACCGTCTTCTCCAATTCGTCCCCTTCGATCGCGTACTGAACCCTAAAATTGGCTT
ACCCACGAAGCAAAATTGAAATTTTTTCATCAAAATCAAATTTGCTCAAAGTTTGAGACATCTCTGGGACCAAACTCAAACTCAAG
GAAAATACTGAGAGATTTGACAAAGGTATCTCTATCAGGCGCTGGGTTATCTATTGTTGCTGTCTTCATTATGATGCTTTTGTTCG
GAATGGAGCTGAGTAGTTATTTGGCAGTCGACACTACCGCAACTGTCGTCGTTGACAAGAGCGTTGATGGTGACTTCTTACGCATT
GATTTCAACATCAGGAGCTGTCGAACTGTGCAACATGGAAGTTTATAAAGGTTTACACAGGACATACCAACAAAGTATTCTGCATC
ACATCCACATTTTCTGTGACCAACGGCAAGTACATTGTGAGCTGATCTGAAGACAACTGTGTGTATCTGTGGGATCTTCAGCATGA
AACTATACTGCAGAGAGTGCAAGGCCACACGGACGCAGTTATCTCTGTCAGTTGCCATCTTGTTCAAAACGAGATTGCTTCATGCG
CTAATCATTTGGATAAAACGATCAGGATATGGAGACATGATACTTGAGAACATGAGTTTGAAATACAACATGTGTGTGTGTGGAAA
TAACTAGATTTGATCTTACATGAAACAATGTTTATTTTTTTTTAAGAACCCCTAAATAGGATATTTGCATTGGAGGACAAA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002874898 transducin family protein [Arabidopsis lyrata subsp. lyrata] | 420 | 4e-039 |
| NP_192182 transducin/WD40 domain-containing protein [Arabidopsis thaliana] | 414 | 2e-038 |
| XP_002874897 hypothetical protein ARALYDRAFT_911930 [Arabidopsis lyrata subsp. lyrata] | 404 | 3e-037 |
| XP_002300840 hypothetical protein POPTRDRAFT_551164 [Populus trichocarpa] | 344 | 2e-030 |
| XP_002520730 WD-repeat protein, putative [Ricinus communis] | 340 | 7e-030 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q2KIG2 WD repeat-containing protein 5 | 274 | 1e-023 |
| P61964 WD repeat-containing protein 5 | 274 | 1e-023 |
| P61965 WD repeat-containing protein 5 | 274 | 1e-023 |
| Q498M4 WD repeat-containing protein 5 | 274 | 1e-023 |
| Q9V3J8 Protein will die slowly | 272 | 2e-023 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9SY00 AT4g02730/T5J8_2 | 414 | 1e-038 |
| B9GSM7 Putative uncharacterized protein HMCA902 | 344 | 2e-030 |
| B9S411 WD-repeat protein, putative | 340 | 5e-030 |
| C0P8T0 Putative uncharacterized protein | 337 | 1e-029 |
| B4FJX4 Putative uncharacterized protein | 335 | 2e-029 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G02730.1 transducin family protein / WD-40 repeat family protein | 415 | 6e-041 |
| AT3G49660.1 transducin family protein / WD-40 repeat family protein | 277 | 6e-025 |
| AT3G20560.1 ATPDIL5-3 (PDI-LIKE 5-3); protein disulfide isomerase | 236 | 3e-020 |
| AT1G50950.1 thioredoxin-related | 228 | 3e-019 |
| AT4G27080.2 thioredoxin family protein | 222 | 1e-018 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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