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Information for unigene UN37050

FASTA Sequence
Unigene ID: UN37050Length: 1296 SSR 
GGAATGAACCAGATTAGTAATTTTATTCGGATCCGAGAATCGTTGGTGCTCTCAAATTCCAAGCCATGAATCGCGGCTCTTCTTCT
TCTTCTTACGGATCCGGCGGGGGAGCTAGTGATTCGTTTCGGAGAAGATCCGATGTAGCACGCAAGCGAAACAATAAAGGTGGAGA
AGCTGCTGCTGCTGCTGCTGCTGCTGAAGTTTCATTCATTGTCGGAACTTGCTCTTCTATGTGTCCTGAACGGGAAAGAGTGACAA
GAGAACGCTTGCGTGATCTCTTAGTGTTTGAGAGGCTTTATGGAAACCCCACTAAATCATCCACTCATCTTGCTGTCAAAAAGTTT
TGCAGAACCCTTTCAGCAGCCGATGTTCAGGCATCGGATATAAGACCGCTTCCGGTCTTAGAAGAAACCCTGAGTTACCTTCTAAG
TTTGCTGGACTCAAGGGAGCACCCCTTTGAAGTTGTTCATGATTTTATTTTCGACAGGACAAGGTCTATCAGACAAGATCTCAGCA
TCCAGAATCTAGCCAACGAGAGAGTCATCCACCTCTACGAGGAAATCGTTAAATTCCATGTCATATCTGGCCAGAGGCTTCAGGGT
AGTAGTGGTGCAAATGTTAGCTCAATGCATCACTTGAACATGGAGCAGCTAGCAAAAACTCTCACCACTTTGTATAATATCTATGA
TGTAAATAGGAAACCAGATTACATCTACGAAAACGAAGCAGAGTTCCGTTCACTCTATGTGCTGCTTCATCTCAATACCAGTAGTG
GAGTGATGGGGGAACCACTGTCTTTGTGGTTTCGCAAGTTGACTTCTAATTTGATAAAGTCCGAGGAAATGTGTTTTGTACGAAAC
CTTCTAAGATCATATCGGAATGGTAATTACCAGAGTTTTCTAAGAACAACGGCTACTGAAGCGACATACTTGCAGTATTGCATAAG
TGAACCCCATATCAGAGAGATGAGATCGTTCGCTGTGGAATGCATTAACAATGTTTGCTACAAGCTTCAACCGTATCCACTCTTGC
AGATATCTCAGCACCTGATGATGAAGGAGATGGATGTTGAATCTTTATGCCAAGAGTGTGGTCTTGAGATACGTACTGATTCCGAT
GGGTGTATTGTGTTGCCAACGAAGCAGACAAACTTCCGCAGTCCAAAGGAAGGTTTTAAAAACTATGATTTGATTGGGATTGATAT
TGGGAGGTTGTTGTGAAACACACAGAGAAATAACAATGTGAGGTTTATCCTTCGATTGTGCCCTAATCCTAAGCCTGTAATCTTTT
TAACCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002877974 SAC3/GANP family protein [Arabidopsis lyrata subsp. lyrata]15417e-169
NP_851016 SAC3/GANP/Nin1/mts3/eIF-3 p25 family protein [Arabidopsis thaliana]15193e-166
AAM65385 unknown [Arabidopsis thaliana]15183e-166
NP_001190086 SAC3/GANP/Nin1/mts3/eIF-3 p25 family protein [Arabidopsis thaliana]13761e-149
NP_191006 SAC3/GANP/Nin1/mts3/eIF-3 p25 family protein [Arabidopsis thaliana]13463e-146

Swiss-Prot top hits (Blast detail)Scoree value
O60318 80 kDa MCM3-associated protein2805e-024
Q9WUU9 80 kDa MCM3-associated protein2724e-023
O74889 SAC3 family protein 12537e-021
Q9USI4 SAC3 family protein 22322e-018
Q9U3V9 Protein xmas-22303e-018

TrEMBL top hits (Blast detail)Scoree value
Q67XV2 Putative uncharacterized protein At3g5438015192e-166
Q8LAG4 Putative uncharacterized protein15182e-166
Q94F11 At3g5437013462e-146
B9SHV9 Leng8 protein, putative10764e-115
B9GLT3 Predicted protein (Fragment)10569e-113

Arabidopsis top hits (Blast detail)Scoree value
AT3G54380.1 SAC3/GANP family protein15191e-168
AT3G54380.2 SAC3/GANP family protein13461e-148
AT3G06290.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SAC3/GANP/Nin1/mts3/eIF-3 p25 (InterPro:IPR005062); BEST Arabidopsis thaliana protein match is: SAC3/GANP family protein (TAIR:AT3G54380.1); Has 1341 Blast hits to 841 proteins in 168 species: Archae - 0; Bacteria - 24; Metazoa - 448; Fungi - 228; Plants - 85; Viruses - 0; Other Eukaryotes - 556 (source: NCBI BLink).4831e-048

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  100%

Unigene MembersMember information