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Information for unigene UN37080
| FASTA Sequence |
| Unigene ID: UN37080 | Length: 859 |
SSR | | GGCGAGTAAGACAACCGAGATAGGACAGAGGACATGGGGGATCATGAAAGGAGTAATGGCAATTGCTTCGCAAAAAGTTGAAGAGT
TCACCAAAGAAGAAGCATCAACCTGGAACCAACAGAATAAAAACGAGGGCAACGGTTACTACCAGAACAAAGCAGCAACGAATTCA
TCTTTTGGAGGGTCACATTCATCATCCAGTTATCAAAACAATAACCGTAACTCGAGTACTTGGGATGACTGGGGTGAGGAGAACAA
TACTAAAAAGGAAGCAGCACCAAAAGTGTCACAGAGTGGTCACCACAACAGTTATGGTAACTCGAGTTCTTGGGATGACTGGGGCG
AAGAGAAGAACAGTACCAAAAAGGAAGCAGCACCAAAGGTGTCGACTTCTAATGATGATGATGATGGTTGGGCTGGTTGGGATGAC
AATGATGGTAAAGATGATGATGATGGCTATTACCAGAGTGCTGCAGGAGATAAGAAGTCTGTAGGTCACAATGGGAAGTCAGACAC
TGCTTGGACCGGTGGAGGTTTTCTCTAACGGTGTTTCAGGATAAATGGTGAATGGAGTTGTACACTTAAGGACAGAGCAAAAGCCT
TGTGGTCTTCTTGCTCTGTCCCAAGAGATAGAGCAGAGTGTGTGGTCTTTTCAACCATTTTCACATTATCGATTGCTTTGGAGTTA
CATGAACTAATGATCGTGTCGTTATTTGTTTCTTCTACAATATAGTTTCTTTATATCGTCATTATATTTGTACAAGCATTATAGAG
GGCTGCTTACTATAAGTTATAGTCTATAACCTATGCAGGTTGGTCTTCAGCTCTTTTTTTTTGATATTCGAACCTTTTTTTTTGG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002881515 hypothetical protein ARALYDRAFT_482750 [Arabidopsis lyrata subsp. lyrata] | 443 | 8e-042 |
| NP_181291 ADP-ribosylation factor GTPase-activating protein AGD7 [Arabidopsis thaliana] | 442 | 1e-041 |
| BAE71192 putative Asp1 [Trifolium pratense] | 429 | 3e-040 |
| NP_190939 putative ADP-ribosylation factor GTPase-activating protein AGD6 [Arabidopsis thaliana] | 342 | 4e-030 |
| XP_002877936 hypothetical protein ARALYDRAFT_485760 [Arabidopsis lyrata subsp. lyrata] | 341 | 5e-030 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O80925 ADP-ribosylation factor GTPase-activating protein AGD7 | 442 | 5e-043 |
| Q9M354 Probable ADP-ribosylation factor GTPase-activating protein AGD6 | 342 | 2e-031 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q2PER6 Putative Asp1 | 429 | 2e-040 |
| B9HBK5 Predicted protein | 279 | 6e-023 |
| B9SP31 Arf gtpase-activating protein, putative | 272 | 4e-022 |
| B9IFR8 Predicted protein | 258 | 2e-020 |
| Q10N88 ARF GAP-like zinc finger-containing protein ZIGA2, putative, expressed | 231 | 2e-017 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G37550.1 AGD7; ARF GTPase activator/ DNA binding / zinc ion binding | 442 | 4e-044 |
| AT2G37550.2 AGD7; ARF GTPase activator/ DNA binding / zinc ion binding | 442 | 4e-044 |
| AT3G53710.1 AGD6; ARF GTPase activator/ DNA binding / zinc ion binding | 342 | 2e-032 |
| AT3G53710.2 AGD6; ARF GTPase activator/ DNA binding / zinc ion binding | 342 | 2e-032 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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