Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN37127

FASTA Sequence
Unigene ID: UN37127Length: 1135 SSR 
GGAACCTTTAGATCTAAGTAACAGAGAAAACGTGTGTGAGAGGGAGAGAGAGAGAGATAGGATGAGAAAGGGAGTTAGAAATCCAG
ACAAAGATCGTCAGATTGTGGAACACGAGTTGCAGGAAAGTGGGTATAGTCCAGAATCCGAGAAAGCGACGAACAAACATGTCGAA
GAAGAGGAAGAGGAAGATGAAGAGGAAGAATCTGTGGAGAAGATCTTCGAAAGCAGAGAAGTACCTTCGTGGAAGAAGCAGCTGAC
TCTGAGGGCTTTCGTGGTGAGCTTTATGCTAAGCATCTTGTTTAGCTTCATCGTCATGAAGCTTAACCTCACGACGGGAATCATAC
CATCGCTCAACGTCTCTGCTGGTCTTCTGGGTTTCTTCTTCGTCAAGACATGGACCAAGGTGCTTTATAAGTCTGGTTACTTGAAA
CAGCCCTTTACTCGCCAGGAGAATACTGTTATTCAGACCTGCGTTGTTGCTTCTTCCGGCTTTGCCTTCAGCGGTAAGGAGAAACA
CTCTTCTTCATATATTGAATCAGATGATTAGGTTATGGCTTTTGCTTATTAATAAATGCAACTAACTGCAGGAGGGTTTGGGACAT
ACCTCTTTGGCATGAGTGAACGGATTGCGAAACAATCAGGAGATGCTTCCCGTGGCTTCAAGGACCCTTCTCTAGGTTGGATTATC
GGTTTCCTCTTTGTAGTCAGCTTTCTTGGTCTCTTCTCTGTTGTTCCCCTGAGAAAGGTTGGTCACAGTTTCTGTTTCCTGCTTTC
ACTACCAAAAAAGGGAGAATAAGTTGAAGAGAGCAGTTTCTATGTGTCTTTGCAGATAATGGTAATAGACTTCAAACTAACATACC
CAAGCGGTACAGCAACTGCTCATCTCATCAACAGTTTTCATACCCCTCAAGGAGCCAAGCTAGCCAAGTAACCATCCTTTCACTTT
AAACTTATTAGTCTCCACTTCTCTGCTTCCTTTTGACTCCATCTTTTGGCTGAATCAGGAAACAAGTGAGGATGTTGGGGAGATTC
TTCTCCTTAAGCTTCTTGTGGAGTTTCTTCCAATGGTTCTTCACCGGAGGTGACAACTGTGGCTTTTCCAACTTCCCAACCTTCGG
ACTCAAAGCTTACCAAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ABB76762 YSL transporter 2 [Noccaea caerulescens]6912e-070
BAJ33889 unnamed protein product [Thellungiella halophila]6841e-069
NP_566584 putative metal-nicotianamine transporter YSL5 [Arabidopsis thaliana]6421e-064
AAL09744 AT3g17650/MKP6_20 [Arabidopsis thaliana]6421e-064
XP_002883075 hypothetical protein ARALYDRAFT_479246 [Arabidopsis lyrata subsp. lyrata]6331e-063

Swiss-Prot top hits (Blast detail)Scoree value
Q9LUN2 Probable metal-nicotianamine transporter YSL56425e-066
Q6R3K4 Probable metal-nicotianamine transporter YSL85951e-060
Q9SHY2 Probable metal-nicotianamine transporter YSL74302e-041
Q5JQD7 Probable metal-nicotianamine transporter YSL124061e-038
Q6H7J6 Probable metal-nicotianamine transporter YSL143952e-037

TrEMBL top hits (Blast detail)Scoree value
Q2XPY4 YSL transporter 26912e-070
A5BB09 Putative uncharacterized protein4805e-046
B9N9G4 Oligopeptide transporter OPT family (Fragment)4724e-045
A5BIS2 Putative uncharacterized protein4662e-044
B9SIR4 Oligopeptide transporter, putative4626e-044

Arabidopsis top hits (Blast detail)Scoree value
AT3G17650.1 YSL5 (YELLOW STRIPE LIKE 5); oligopeptide transporter6523e-068
AT1G48370.1 YSL8 (YELLOW STRIPE LIKE 8); oligopeptide transporter5951e-061
AT1G65730.1 YSL7 (YELLOW STRIPE LIKE 7); oligopeptide transporter4302e-042
AT3G27020.1 YSL6 (YELLOW STRIPE LIKE 6); oligopeptide transporter3153e-029
AT5G41000.1 YSL4 (YELLOW STRIPE LIKE 4); oligopeptide transporter3144e-029

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  100%

Unigene MembersMember information