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Information for unigene UN37232

FASTA Sequence
Unigene ID: UN37232Length: 1011 SSR 
GCCAAAACTGGAGTCGGTTCTCTACTTCTGCCGTCAAATGACCGATGCTGCGCTCGTAACCATTGCTAGGAACCGTCCCAACATGA
CCCGCTTCCGTTTGTGCATCATTGAGCCGAAAGCCCCTGACCATCTGACTCTAGAGCCACTTGATGTGGGGTTTGGTGCAATAGTA
GAGCACTGCAAAGATCTCCGGCGGCTCTCCCTGTCGGGGCTGTTGACCGACAAGGTCTTCGAATACATTGGCACGTATGCAAAGAA
GATGGAAATGCTCTCGGTAGCGTTTGCAGGAGACAGTGACTTGGGGATGCATCATGTTTTATCAGGGTGCGATAGCTTGAGGAAGC
TAGAGATAAGGGACTGCCCCTTTGGAGACAAGGCGCTTTTGGCAAATGCTTCGAAGCTGGAGACAATGCGATCTCTTTGGATGTCT
TCCTGTTCCGTGAGTTTTGGAGCCTGCAAGTTGTTAGGACAGAAGATGCCAAAGCTCAATGTGGAAGTGATCGATGAACGGGGTCC
GCCTGACTCGAGGCCCGAGAGCTGCCCTGTTGAAAGAGTGTTCATATACCGAACAGTGGCTGGTCCTCGGTTTGACATGCCTGGTT
TCGTCTGGAACATGGACCAACAACACTCAACCACGAGGTTTTCTAGGCAAATCATCACTACTAACGGGTTATAGAACAACTAAATT
AAACAAGGTACATTCTTTCATTAAATCCTTGCTCGTCATCTCCCATATAAATCGTTCCAGTTTTGTAACACTAGAGAGAGAGAGAG
AGAGAGAGAGAGAGAGCTCGGCCTGCACAAGTTTAATTATGGGATGCTTCAAATAACCAGCCAAGCTCAGGATCACTGAATAAGTG
AGGAGAGCGAGATAGATCTGCAAGACGTTTGTATTTTTAGATTGTTGTCTGTATGTTTGTTTACTTAGTGAGAGATCCTGGTGGCG
TATTATTTTCGTCAAGAAGATGATAAGAGATATTTAAAAGACGAATGTAAAAAATATTGTTGTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_567135 protein TRANSPORT INHIBITOR RESPONSE 1 [Arabidopsis thaliana]11231e-120
ADB92042 transport inhibitor response 1 [Arabidopsis thaliana]11231e-120
ADB92043 transport inhibitor response 1 [Arabidopsis thaliana]11231e-120
ADB92044 transport inhibitor response 1 [Arabidopsis thaliana]11231e-120
ADB92045 transport inhibitor response 1 [Arabidopsis thaliana]11231e-120

Swiss-Prot top hits (Blast detail)Scoree value
Q570C0 Protein TRANSPORT INHIBITOR RESPONSE 111272e-122
Q9ZR12 GRR1-like protein 18073e-085
Q0DKP3 Transport inhibitor response 1-like protein Os05g01505007392e-077
Q7XVM8 Transport inhibitor response 1-like protein Os04g03956006863e-071
Q9LW29 Protein AUXIN SIGNALING F-BOX 26792e-070

TrEMBL top hits (Blast detail)Scoree value
D3K008 Transport inhibitor response 1 (Fragment)11231e-120
D0ES26 Transport inhibitor response 19868e-105
B9S3W2 TRANSPORT INHIBITOR RESPONSE 1 protein, putative9723e-103
A4KA30 Transport inhibitor response 19706e-103
B9I9W7 F-box family protein9681e-102

Arabidopsis top hits (Blast detail)Scoree value
AT3G62980.1 TIR1 (TRANSPORT INHIBITOR RESPONSE 1); auxin binding / protein binding / ubiquitin-protein ligase11282e-123
AT4G03190.1 GRH1 (GRR1-LIKE PROTEIN 1); auxin binding / protein binding / ubiquitin-protein ligase8073e-086
AT3G26810.1 AFB2 (AUXIN SIGNALING F-BOX 2); auxin binding / ubiquitin-protein ligase6792e-071
AT1G12820.1 AFB3 (AUXIN SIGNALING F-BOX 3); auxin binding / ubiquitin-protein ligase6513e-068
AT5G49980.1 AFB5 (Auxin F-Box protein 5); ubiquitin-protein ligase5492e-056

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  100%

Unigene MembersMember information