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Information for unigene UN37299
| FASTA Sequence |
| Unigene ID: UN37299 | Length: 1004 |
SSR | | GCAGCTCCATTGGTCTTCCTCTACGTCCGGGTGTGCAATGTTGCACTTTCTACGTACAAAACGGCTTCTGTAAGTTTGGATCAACA
TGTAAATTTGATCATCCTGTGGGAGTCATCAGATACAATCCTTCTGCATCCTCCCTCGCTGATGCACCCGTGGCTCCTTTCCCTCT
CTTGCCCTCTTCTTCTTCGTCTGCTGCTGAGCTCATTTCAGGGGATGATCCTTACTTGTCAACCTCAAGAAGCGCATCTAACAACA
TCTCAGCTGGTTTGATATTCTCCCAGAGTGGCGTCTCAGTTCCATTCAATGACCTCCAGCTCTCCACCCAGACCTCTCTTTCCCTA
ACCGGTACCAGAATCACAAGACAAGGCCGAGAAATCCGTCGATCCTTTTGAAAAATAAAGGGGTAAGCATACGCAGGCCTCAGGAT
CATTCTTAATATTATATCATATATATATATATAGAAGCATGTGATGTGAGATATTATAATCTCCCTACCCTAAACCCTACCTAAAA
AAGAACAAGTTTAGTTGAGTAGAAGAACCGATTGAGAATCACATATATTTAAGAGGAAATGTATATGTGCATATATATCAAAAAAA
AAACAAGAAAAGGCTTTTTCTTTTTCTTTTTATGTGTTGTGTGTGTGTGTGTGTGTGTGTGTGTAAGGTTTGTATAGTGAGGTTTC
TTTATATTGTTCGTGCTTCTACTTCAGGCCCATTGCGGCTGAAAGAAAACGCAAGAAAAAAAAAAGGAATGAACTCAAACGCTCTT
ACTTCTTTCTTTTAGAACCCTTCTTCCCTTTAGCGAGTTGGTGACTTATATACAGTGATGAACTTTCATGTGTTGTATATTTACAG
CTTGAATCATATGTGTTGTTAATTTGTTGATGTCGCTGCTTCACACATTAGATTATGTCTTTTTGTGGGACTCTCTTTGAAGCTTC
GCACGTTAATGTTGTATAAGTTTCATTTTGAATTGAAAGTTGTACGTAGTTTTGAGCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002880326 zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp. lyrata] | 498 | 4e-048 |
| NP_182306 zinc finger CCCH domain-containing protein 32 [Arabidopsis thaliana] | 486 | 1e-046 |
| AAO42129 unknown protein [Arabidopsis thaliana] | 486 | 1e-046 |
| AAC63639 unknown protein [Arabidopsis thaliana] | 486 | 1e-046 |
| NP_001078077 zinc finger CCCH domain-containing protein 32 [Arabidopsis thaliana] | 486 | 1e-046 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q84W91 Zinc finger CCCH domain-containing protein 32 | 486 | 5e-048 |
| Q5NAV3 Zinc finger CCCH domain-containing protein 5 | 248 | 2e-020 |
| Q6NPN3 Zinc finger CCCH domain-containing protein 58 | 222 | 2e-017 |
| Q9SQU4 Zinc finger CCCH domain-containing protein 34 | 221 | 3e-017 |
| Q5NAW2 Zinc finger CCCH domain-containing protein 6 | 219 | 4e-017 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A8MR17 Uncharacterized protein At2g47850.2 | 486 | 7e-047 |
| B9S3U9 Nucleic acid binding protein, putative | 377 | 3e-034 |
| B9RT23 Nucleic acid binding protein, putative | 269 | 1e-021 |
| A5B3A4 Putative uncharacterized protein | 268 | 1e-021 |
| B8AC88 Putative uncharacterized protein | 248 | 3e-019 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G47850.1 zinc finger (CCCH-type) family protein | 487 | 3e-049 |
| AT2G47850.2 zinc finger (CCCH-type) family protein | 487 | 3e-049 |
| AT2G47850.3 zinc finger (CCCH-type) family protein | 487 | 3e-049 |
| AT5G18550.1 nucleic acid binding / zinc ion binding | 222 | 2e-018 |
| AT3G06410.1 nucleic acid binding / zinc ion binding | 221 | 2e-018 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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