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Information for unigene UN37303
| FASTA Sequence |
| Unigene ID: UN37303 | Length: 951 |
SSR | | GGTGTATGACCAACGGTCTCATGGTTTACTAAAGAGAAACAAGAACAAGAACATGAACGAATAACTAAATATTAAACATCTAAAAC
AAATAAACACACGAATTTCGCTATGGTCGGATAAAAAAAAAAAATGCCAAATCACCGATCCGAACAAAATTATCAGTCGCAGTAAA
CAGACAAAATTTAAATATTTCTAACATGCAAAACTGTTGTTGATATCCAATCTCGAAGCGGTCTTGTGTTGGTAGATTAGCTCTAG
ACTGAACTCTTCTGCTTCTGTAAACCGTTATTCATTGCCGGTTCTAGACATCTCTGTACTAGTAGTAGTATCACGCGCCTTCTTAA
CAGGTTGTTTTGCAGATTCAGCTTTGAACTTTCTCTTCTTCTTAGCTCTCCTCCTCTTTCTCTCTTCCTGTGTAAGCTCAGACTCA
TCTTCATTGACATCTCTCATCTTCATTTTTGTCTCCTTCTTTTTACCACCAAAGAAATCCTCATATCTGGCCTTTCCCAGTTTGTC
TGACTCTTCATTGTCTTCACCAGCAAAAGTACCGAACTCTCCATCTTCATCTTCTTCATCATCCTCATCCTCATCATCATCATCAT
CTTCTTCGTCTTCATCAGCAGCCTCACCAATGAGCCTCTCATTGTCAGTGAAACCAACCCAGGAAGGTGTAATACGGTTTCCTTGG
TCATTAGCTATGATCTCAACATGACCATTCTTGTAAACACCAACACAGGAGTAGGTAGTACCAAGATCTATCCCTATCACTGTTCC
TAGCTTGGTAGCCTCTTCTTTGGCAGTTGAAAACGCAAATAAACATCCGAAGAAGATGATTGCGAGCACAACGGTGCCGTTTGCTC
CGAGTGAGCGAGCCATATCTAATGCTTGTGTGGTCGAGCTCTCTTCTTCTCTCTTTAGATCTCTCCTTCTTCTTCTTCGCTTCCTT
TTTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ34315 unnamed protein product [Thellungiella halophila] | 434 | 1e-040 |
| XP_002868566 hypothetical protein ARALYDRAFT_493781 [Arabidopsis lyrata subsp. lyrata] | 428 | 5e-040 |
| BAA13948 luminal binding protein [Arabidopsis thaliana] | 424 | 2e-039 |
| BAA12348 luminal binding protein (BiP) [Arabidopsis thaliana] | 424 | 2e-039 |
| NP_851119 Luminal-binding protein 2 [Arabidopsis thaliana] | 424 | 2e-039 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q39043 Luminal-binding protein 2 | 424 | 7e-041 |
| Q9LKR3 Luminal-binding protein 1 | 406 | 8e-039 |
| P49118 Luminal-binding protein | 362 | 1e-033 |
| Q03684 Luminal-binding protein 4 | 354 | 9e-033 |
| Q03685 Luminal-binding protein 5 | 354 | 9e-033 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q3E8J0 Putative uncharacterized protein At5g42020.2 | 424 | 1e-039 |
| Q0ZUG6 Putative luminal-binding protein | 423 | 1e-039 |
| B9RYP6 Heat shock protein, putative | 375 | 5e-034 |
| Q9FSY7 Putative luminal binding protein | 374 | 7e-034 |
| B9GL18 Predicted protein | 373 | 9e-034 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G42020.1 BIP2; ATP binding | 424 | 6e-042 |
| AT5G42020.2 BIP2; ATP binding | 424 | 6e-042 |
| AT5G28540.1 BIP1; ATP binding | 406 | 8e-040 |
| AT1G09080.1 BIP3; ATP binding | 266 | 1e-023 |
| AT5G66540.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA processing; LOCATED IN: cytosol, nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: U3 small nucleolar ribonucleoprotein complex, subunit Mpp10p (InterPro:IPR012173), Mpp10 protein (InterPro:IPR007151); Has 76240 Blast hits to 38667 proteins in 1479 species: Archae - 252; Bacteria - 6537; Metazoa - 31185; Fungi - 9935; Plants - 3937; Viruses - 750; Other Eukaryotes - 23644 (source: NCBI BLink). | 242 | 8e-021 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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