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Information for unigene UN37369
| FASTA Sequence |
| Unigene ID: UN37369 | Length: 1175 |
SSR | | GGAGAGAGAACAAAAATGATACGACAAAGGAGGTGAAGAGCAAGAGGAAGAGAGCAAGAACAAGCAAAACCAGTGGAGAAGTAGAA
AGCCAACGTATGACTCATATCGCGGTCGAGAGGAACCGTAGAAAGCAAATGAACGAGCATCTTCGTGTTCTCAGGTCTCCTATGCC
TGGATCCTACGTTCAAAGGGGAGATCAAGCGTCGATCATAGGTGGAGCAATAGAGTTTGTGAGAGAGAGAGAGAACAAGTCGTGCT
TGGCTGATGTGGAGGTGAAGCTGCTAGGGTTTGACGCTATGATCAAGATACTTTCAAGAAGAAGACCAGGACGACTGATTAAGACT
ATTGCTGCTTTGGAGGATCTTCATCTCTCCATCCTTCACACTAACATCACTACCATGGAACAAACTGTCCTCTATTCCTTCAATGT
CAAGGCAAGTTTTACTTTCTTACTTTATCATTATAGGAGTTTTATATATAAGTACATAGTACATATCAAGTTTTTTACCCATATGT
TTGGACTGCTTTAATATAAATGTTAATTTTTTAGTAAGCTATGGGAAAAAGTAGTAGTCTAGTGATTAGCTAGTGCAGTTTCTATC
ATTGGGCGGATGTTTGCTTAGCGGCGATTCCATGGGTTTATTAAATAGGCAATAGCCATGTATATATATAAAACTCAATTACAGTT
AGATAATATATATAAATTACATATAGCTTTGTCATTATAAGCATATGCATTATTTAAATGTATGGTATAATTCCAAAGTTTACTAA
ATAAAAATCAGGGCAGTACAAAGTTAAAAGGAAAAAGGTTTACAGCAACACCTAGTTACAGGTTTGGTTTCCCTCTACACAGAAAA
GAGAAAATCATAAAGGATAGTTACAAAGAAGATACATATGTATTACGAATTGATATTGTTATAGTATCTAGCAACCGCAAAAAGAT
AACATCAGGTAGGTATAACACACGTGCAGATTACAAGTGAGACGAGGTTTACTGCAGAAGACATTGCAAGTTCCATCCAAGAGATA
TTTAGTTTTATTCACGCAAATACCACCATGTAATAATTTTTATATTTCGCCTGTCATTTCTGTTAAAGGTACTTTTCATAAGTTTA
TGTTGGCGGCTTATAAAAAAAAGTCTATGTTTGTTCCATTTTAGATCTTACATGTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002883481 hypothetical protein ARALYDRAFT_898955 [Arabidopsis lyrata subsp. lyrata] | 372 | 2e-033 |
| BAB01355 unnamed protein product [Arabidopsis thaliana] | 366 | 1e-032 |
| NP_189056 transcription factor FAMA [Arabidopsis thaliana] | 366 | 1e-032 |
| XP_002518108 DNA binding protein, putative [Ricinus communis] | 328 | 3e-028 |
| XP_002300174 predicted protein [Populus trichocarpa] | 321 | 2e-027 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q56YJ8 Transcription factor FAMA | 366 | 5e-034 |
| Q9M128 Transcription factor bHLH57 | 267 | 1e-022 |
| Q9SK91 Transcription factor bHLH94 | 253 | 6e-021 |
| Q9C7T4 Transcription factor bHLH96 | 248 | 2e-020 |
| O81037 Transcription factor bHLH70 | 245 | 5e-020 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RWI9 DNA binding protein, putative | 328 | 2e-028 |
| B9GFX7 Predicted protein (Fragment) | 321 | 1e-027 |
| A5AFQ7 Putative uncharacterized protein | 314 | 8e-027 |
| C0SVC8 Putative uncharacterized protein At3g24140 (Fragment) | 314 | 8e-027 |
| A2Y807 Putative uncharacterized protein | 292 | 3e-024 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G24140.1 FMA (FAMA); DNA binding / transcription activator/ transcription factor | 366 | 4e-035 |
| AT4G01460.1 basic helix-loop-helix (bHLH) family protein | 267 | 1e-023 |
| AT1G22490.1 basic helix-loop-helix (bHLH) family protein | 253 | 5e-022 |
| AT1G72210.1 basic helix-loop-helix (bHLH) family protein (bHLH096) | 248 | 2e-021 |
| AT2G46810.1 basic helix-loop-helix (bHLH) family protein | 245 | 5e-021 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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