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Information for unigene UN37391

FASTA Sequence
Unigene ID: UN37391Length: 1231 SSR 
GGAAAATTCCAAGCCATGAATCGCGGCTCTTCTTCTTCTTCTTACGGATCCGGCGGGGGAGCTAGTGATTCGTTTCGGAGAAGATC
CGATGCAGCACGCAAGCGAAACAATAAAGGTGGAGAAGCTGCTGCTGCTGCTGCTGCTGAAGTTTCATTCATTGTCGGAACTTGCT
CTTCTATGTGTCCTGAACGGGAAAGAGTGACAAGAGAACGCTTGCGTGATCTCTCAGTGTTTGAGAGGCTTTATGAAAACCCCACT
AAATCATCCACTCATCTTGCTGTCAAAAAGTTTTGCAGAACCCTTTCAGCAGCTGATGTTCAGGCATCGGATGTAAGACCCCTCCC
GGTCTTAGAAGAAACCCTGAGTTACCTTCTAAGTTTGCTGGACTCAAGGGAGCACCCCTTTGAAGTTGTTCATGATTTTATTTTCA
TATCTGGCCAGAGGCTTCAGGGTTGTAGTGGTGCAAATATTAGCTCAATGCATCACCTGAACATGGAGCAGCTAGCAAAAACTCTC
ACCACTTTGTATAATATCTATGATGTAAATAGGAAACCAGATTACATCTACGAAAAAGAAGCGGAGTTCCGTTCACTCTATGTGCT
GCTTCATCTCAATACCAGTAGTGGAGTGATGAGGGAACCACTGTCTTTGTGGTTTCGCAAGTTGACTTCTAATTTGATAAAGTCCA
AGGAAATGCGTTTTGTACGGAACCTGTTAAGATCATATCGGAATGGTAATTACCAGAGTTTTTTAAGAACAACGGCTTCTGAAGCG
ACATACTTGCAGTATTGCATAAGTGAACCCCATATCAGAGAGATGAGATCGTTCGTTCTGGAATGCATAAATAATGTTTGCTACAA
GCTTCAACCTTATCCACTCTTGCGGATATTTCAGCAGCTGATGATGAAGGAGTTGGATGTTGAGTCTTTATGCCATGAGTGTGGTC
TTGAGATGCGTACTGATTCCGATGGGTGCATTGTGTTGCCAACGAAGCAGACAAACTTCCATAGTCCAAAGGAAGGTTTTAAAAAC
TATGATCTGACTGGAATCGAAATTGAGAGGTGGTTGTGAAAACACATAAAACATAACAATGTGAGTTGTATCATTCACTTGTGCCC
TAATCCTAAAGCCTGTAATCAATCTTTTGGATCTTTTATAACCCAAAAAAATGTATACATTCATGCCCTATTCGTTGTCTCATGAT
TGAACAATCAGCAGAGACATGCTGAGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002877974 SAC3/GANP family protein [Arabidopsis lyrata subsp. lyrata]8445e-088
NP_851016 SAC3/GANP/Nin1/mts3/eIF-3 p25 family protein [Arabidopsis thaliana]8382e-087
NP_001190086 SAC3/GANP/Nin1/mts3/eIF-3 p25 family protein [Arabidopsis thaliana]8382e-087
AAM65385 unknown [Arabidopsis thaliana]8373e-087
NP_191006 SAC3/GANP/Nin1/mts3/eIF-3 p25 family protein [Arabidopsis thaliana]6626e-067

Swiss-Prot top hits (Blast detail)Scoree value
O60318 80 kDa MCM3-associated protein1416e-008
O74889 SAC3 family protein 11372e-007
Q9WUU9 80 kDa MCM3-associated protein1282e-006

TrEMBL top hits (Blast detail)Scoree value
Q67XV2 Putative uncharacterized protein At3g543808382e-087
Q8LAG4 Putative uncharacterized protein8372e-087
Q94F11 At3g543706624e-067
B9GLT3 Predicted protein (Fragment)5782e-057
B9SHV9 Leng8 protein, putative5665e-056

Arabidopsis top hits (Blast detail)Scoree value
AT3G54380.1 SAC3/GANP family protein8389e-090
AT3G54380.2 SAC3/GANP family protein6622e-069
AT3G06290.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SAC3/GANP/Nin1/mts3/eIF-3 p25 (InterPro:IPR005062); BEST Arabidopsis thaliana protein match is: SAC3/GANP family protein (TAIR:AT3G54380.1); Has 1341 Blast hits to 841 proteins in 168 species: Archae - 0; Bacteria - 24; Metazoa - 448; Fungi - 228; Plants - 85; Viruses - 0; Other Eukaryotes - 556 (source: NCBI BLink).1821e-013

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  100%

Unigene MembersMember information