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Information for unigene UN37468

FASTA Sequence
Unigene ID: UN37468Length: 614 SSR 
GGGACTCGACGAGATGGTGATGATACAGAATGGTTTTGTAATGGGAGGGATGTTAAGCTCTCACGATCACTTCCGTGACTTGAGGC
TCAACGTCGATGGCATGTCTTACGAGCAACTTTTGGAGCTTGGTGATAGAATTGGGTATGTGGACACTGGACTTAATGAAAAGCAG
ATCAAAACCTGTCTCTGCAAAGTCAAACAATTTCAGAAAATTGCACAACTACAAGATAGAAAGTGCAGCATCTGTCAAGAAGAGTA
TGAGGGTAAGGACGAGGTAGGGAAGTTAAGATGTGGGCACAGGTACCATATCCACTGTGTGAAACAATGGCTGCTGAGGAAGAACT
CTTGTCCTGTCTGTAAAACGATGCCATATGTTTAAAAAGTCTTAGATATATAGAGATAAGTTCTCCTCCTTTGATGATGATGATGA
TTCCTGATCTGGAGATTGATCCCAATCACTATCTGATGTTAGATTCTTCTCTGGGGATTATTGCTCATGATTTGCTATTTTATGCT
GATGAAAAACATTTGTATGAAGCAGCAATTTGTTACTATTACTTACCTATGGAACAAGTGAGAGAGACATTGTGAACCCCACATTG
CTTGTGGGTTAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ADK63390 C3HC4 type zinc finger protein [Brassica rapa]6074e-061
XP_002888945 hypothetical protein ARALYDRAFT_476516 [Arabidopsis lyrata subsp. lyrata]5269e-052
NP_177517 RING/U-box domain-containing protein [Arabidopsis thaliana]5026e-049
XP_002890255 hypothetical protein ARALYDRAFT_312759 [Arabidopsis lyrata subsp. lyrata]4344e-041
NP_173239 RING/U-box domain-containing protein [Arabidopsis thaliana]4301e-040

Swiss-Prot top hits (Blast detail)Scoree value
Q641J8 E3 ubiquitin-protein ligase RNF12-A1385e-008
Q7T037 E3 ubiquitin-protein ligase RNF12-B1385e-008
Q9H9V4 RING finger protein 1221304e-007
Q8BP31 RING finger protein 1221304e-007
Q9Y252 E3 ubiquitin-protein ligase RNF61287e-007

TrEMBL top hits (Blast detail)Scoree value
Q9C9T6 Putative RING zinc finger protein; 69105-673105024e-049
Q8LCH0 Zinc-finger protein (C-terminal), putative4309e-041
Q944L9 At1g17970/F2H15_164309e-041
Q9LMT3 F2H15.19 protein4228e-040
A5BVW4 Putative uncharacterized protein3913e-036

Arabidopsis top hits (Blast detail)Scoree value
AT1G73760.1 zinc finger (C3HC4-type RING finger) family protein5023e-051
AT1G17970.1 zinc finger (C3HC4-type RING finger) family protein4306e-043
AT1G45180.1 zinc finger (C3HC4-type RING finger) family protein3062e-028
AT2G37150.1 zinc finger (C3HC4-type RING finger) family protein3062e-028
AT2G37150.2 zinc finger (C3HC4-type RING finger) family protein3062e-028

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  100%

Unigene MembersMember information