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Information for unigene UN37580

FASTA Sequence
Unigene ID: UN37580Length: 1281 SSR 
GGCTTTCTGTCGGATCTTGCAACTTCGGTGCGAAAGGAGTCAACGCGATGCTCGAGCATTGCAAGCTTCTTGAGGAGCTGTCGGTG
AAGAGGCTGAGAGGGATTCACGAAGCGGCTGAGTTGATTCATTTGCCTTCGTCTCCTTCGCTTAGATCTATTTGCTTGAAGGAGCT
TGTTAACGGTCAGGTGTTTGAGCCTTTGGTTGCTGGTACTAGGACGCTGAAGACGCTCAAGATTATACGTTGTTTGGGTGATTGGG
ATATGTTTTACAGATGATCGGTGAAGGAGAGAGTTCGTTGAGTGAGATTCATCTTGAGAGGCTCCAAGTTAGTTACTTTGGGCTTT
CCGCGGTGTCGAAATGCTCAAAGGTTGAGACTTTGCATATAGTGAAGACACCGGAGTGCTCCAACTTTGGTTTGATCGATGTCGCC
AAGAGATGCAAGCTGCTGAGGAAGCTTCATATAGATGGTTGGAGGACTAATAAGATTGGCGACGAAGGTCTGCTGGCTGTAGCTAG
GCACTGCTTGAACTTGCAAGAGTTAGTGCTGATCGGTGTGAACGCAACGCACAAGAGTATATCAGCGATTGCTTCGAACTGCGAGA
AACTCGAGAGGCTAGCGCTATGCGGGAGTGGAACGATGGGGGATACGGAGATCGCTTGCATCGCTAAGAAATGCGGGGCGTTGAGG
AAGTTCTGTATCAAAGGATGTGCGGTTTCGGATCTAGGGATCGAGGCGCTCGCTGCTGGTTGTCCTAACTTGGTGAAGCTGAAGGT
GAAGAAATGTAAAGTGGTGACTGGAGAGATTGGAGAGTGGCTTAGGGAACAGAGGAGGACGCTTGTGGTGAGTATGGATGGTGATG
AAACGGAAGCAGCGGTTGCGGTTGATGGTGAGAGTGAAGCAGCGGTGGAGGAGCCGAGGGTGGGTCAAGCGGGGGAGATTGTTGGT
TCAGGTAATGGTGGTGGTGGTGGCGGTAGCGGAAACAATGGAGGAAGTAGATTAGCGATGATTAGGTCAAAGTTTGGGCTCTTTGC
TGGAAGGAACTTAGTAAGTTGCAGATTCAGGAGGTGGTCTCATCCTAATAATGACAATGGTTCTAGTTCTACTTGATCAGCTATTA
CAAGTCCCCTATAAAACGAAAATTGTCAAAAAAAGCTTTTCTGCCTTCCTGTTTTGATTTCTGTTTGTCTGTAATCCTATTTCATG
TGTGTGTGTGTGTGTGAAAGAAGAAGACTTTGTCAATTAGAAAAGTCCATTCCAAGGAAGAATGTTATTTGTTTTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002865015 hypothetical protein ARALYDRAFT_919984 [Arabidopsis lyrata subsp. lyrata]11842e-127
NP_569047 F-box protein SKIP2 [Arabidopsis thaliana]11635e-125
BAE98487 hypothetical protein [Arabidopsis thaliana]11626e-125
XP_002876014 vier F-box protein 2 [Arabidopsis lyrata subsp. lyrata]9216e-097
NP_566928 F-box/LRR-repeat protein 16 [Arabidopsis thaliana]9101e-095

Swiss-Prot top hits (Blast detail)Scoree value
Q9FE83 F-box protein SKIP211686e-127
Q9SN10 F-box/LRR-repeat protein 169105e-097
Q9S9X4 Putative F-box/LRR-repeat protein 87133e-074
Q9C626 F-box protein At1g470566588e-068
Q9C5D2 F-box/LRR-repeat protein 41766e-012

TrEMBL top hits (Blast detail)Scoree value
A3KPF1 At3g500809107e-096
A5BCN7 Putative uncharacterized protein (Fragment)7933e-082
B9SFZ9 Skip-2, putative7924e-082
B9HHB3 Predicted protein7862e-081
Q84QE1 Avr9/Cf-9 rapidly elicited protein 1897701e-079

Arabidopsis top hits (Blast detail)Scoree value
AT5G67250.1 SKIP2 (SKP1/ASK1 INTERACTING PROTEIN 2); ubiquitin-protein ligase11722e-128
AT3G50080.1 VFB2 (VIER F-BOX PROTEINE 2); ubiquitin-protein ligase9104e-098
AT4G07400.1 VFB3 (VIER F-BOX PROTEINE 3); ubiquitin-protein ligase7133e-075
AT1G47056.1 VFB1 (VIER F-BOX PROTEINE 1); ubiquitin-protein ligase6587e-069
AT4G15475.1 F-box family protein (FBL4)1765e-013

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  100%

Unigene MembersMember information