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Information for unigene UN37601

FASTA Sequence
Unigene ID: UN37601Length: 808 SSR 
CGCTCTTCAAATTCACACATATCCCATATCCTCATTATACAAATATAAATTACATTTTTTTAATCCAACAAATATTTTAAACAATA
TCTTAAACAAAGAAACAATCTGAGACTTAATTTCCAAAATGAAAAAAAATAAACTGAAGAAATGGAGAGTGACTCTCAAAGTAGAC
GCAATGCAACAAACTCTATTCACACTAAAAGCAATTTGAAAAAAGAAGAAGAAGAAGAGATAAGAGACTGATGCCAAGATCCAAAG
GCCTTTCTTTGCTTTTATCAGCCTCCCACTGCAACTTCACTTGTCATAATCTCAGCCTTCACTTGGATGTTGTTGGATTCCGGTTT
AATCTCTTCCGGTTTGGCAGTAACCTTCTCTTCCTCTGCTTCTTCTTTCTTCTCTTCAGGTTTAGCAGCAGCCACAGTAGAAGAAG
CCTTATGCTCCTCTCTTCTTTTCTCTGCTTCTTCTTTCTTCCTCTCTTTGCCCTTCACTGACTTCTCTTGAGCCTCAGTCTTTGGC
TGAGACTTTGTTATAGTCTTCTTCAAGCTAGATGATGATAATGGTGAGTCTCTTGGTCTTGCCACAACACGAGGAACAGTCTCACT
TCCTGTTGTTGCATCACTGCTACTCTTTCTACGTCCTAGCTTTGGAGATTTAGGACGAGTAGTTGGTATCTTCTTCAGTTCAACCT
TAGGTGGAGGCTCTTTGTAGAAACTAGGCATGGGACCAGCCTTGAACGTCAAGCTCTTCCTCAACCTTTTGATCTCTTCTTCCTGA
CTCTCCTTTGACTCGCCTGCAAAGTTGTCTTCTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_565829 TPX2 (targeting protein for Xklp2)-like protein [Arabidopsis thaliana]4957e-048
XP_002881415 hypothetical protein ARALYDRAFT_482558 [Arabidopsis lyrata subsp. lyrata]4804e-046
XP_002308335 predicted protein [Populus trichocarpa]2887e-024
XP_002323363 predicted protein [Populus trichocarpa]2781e-022
XP_002524093 conserved hypothetical protein [Ricinus communis]2716e-022

Swiss-Prot top hits (Blast detail)Scoree value
P54696 Myosin-H heavy chain1485e-009
Q8STA9 UPF0329 protein ECU05_1680/ECU11_00501226e-006

TrEMBL top hits (Blast detail)Scoree value
Q9SJ62 At2g35880/F11F19.214955e-048
B9H9M5 Predicted protein (Fragment)2885e-024
B9IIH6 Predicted protein (Fragment)2787e-023
B9SDM4 Putative uncharacterized protein2714e-022
B6TK06 Lymphoid organ expressed yellow head virus receptor protein2643e-021

Arabidopsis top hits (Blast detail)Scoree value
AT2G35880.1 FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Targeting for Xklp2 (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32330.3); Has 14997 Blast hits to 8919 proteins in 586 species: Archae - 10; Bacteria - 1037; Metazoa - 6567; Fungi - 1700; Plants - 594; Viruses - 59; Other Eukaryotes - 5030 (source: NCBI BLink).4953e-050
AT4G32330.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Targeting for Xklp2 (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G25480.1); Has 4728 Blast hits to 3313 proteins in 331 species: Archae - 4; Bacteria - 347; Metazoa - 2216; Fungi - 461; Plants - 233; Viruses - 22; Other Eukaryotes - 1445 (source: NCBI BLink).2372e-020
AT4G32330.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Targeting for Xklp2 (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G25480.1); Has 4582 Blast hits to 3307 proteins in 347 species: Archae - 4; Bacteria - 425; Metazoa - 2127; Fungi - 421; Plants - 244; Viruses - 22; Other Eukaryotes - 1339 (source: NCBI BLink).2372e-020
AT4G32330.3 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Targeting for Xklp2 (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G25480.1); Has 4728 Blast hits to 3313 proteins in 331 species: Archae - 4; Bacteria - 347; Metazoa - 2216; Fungi - 461; Plants - 233; Viruses - 22; Other Eukaryotes - 1445 (source: NCBI BLink).2372e-020
AT2G25480.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Targeting for Xklp2 (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32330.2); Has 1787 Blast hits to 1426 proteins in 179 species: Archae - 0; Bacteria - 73; Metazoa - 901; Fungi - 138; Plants - 185; Viruses - 2; Other Eukaryotes - 488 (source: NCBI BLink).2158e-018

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  100%

Unigene MembersMember information