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Information for unigene UN37623
| FASTA Sequence |
| Unigene ID: UN37623 | Length: 835 |
SSR | | GATTATTATTACCCCCGGCTGGAATAGTTAACTGTCCAATCTGAAGAATCGATTCATATCTTTCGTGAGATTAACCTCCCTATTGT
CCTTCTTCTTCTTAAACAGAAGTTTATCGGCTTTGGTTATCCTCTGTTGGACAAACTCCTGTTGATTGACCATATTATTGTGCCGG
TCAATTTCCGGCAAGTTCCGAAAAGTAGTAGTCACTTGGTTCATACCCTCAACGGAGGGCCACACCCCAGGGGTAGGATCGTAGGG
ACTGTAAATGATAGCCCCGGCATTAATCCCACATAAAGTGAATATCTCATGCGCTTTTTCGAGCAAGCCCCTCTTCCTTTTTTGTA
GGTTGTTTTTCTCGAGGAGTTGTTGACGATGAAAGCAAGTTTCACCTTCCTTCTCGTCATGGTGTTTGTTGTGTTTATTACTTTGT
GTAGTGTGTGTTGTGTTTTGAGTTCAGGGATGTGTGTGTCTTATATAGTGATGGAGGGCTATGAAATTTTTTATCTTTTTAAGTAG
GGAATATATATAGATTTATGAAGTAAAAAAAACAGAAAGAATAATCACCTACCAATAAAGATGTGATTAATATTTTTATGGACTAT
TGAGTTAAATTATATATATATATACATATGACTGAATAGTCGACAAATATAGTAATCACATTTTTATCGGCCGGTAATATTATTGA
ATGTTTCAATAATTATAGTTCAGTCCTCATTATATTTGTCGATAAAAATATTATTGAAAACCAAATCTTAGAAGTTGTCCCAAATA
TTTGCAATGATTTGTTTTAAAGTAACCATATAATTTTTGCAAATACAGTTTATATGACCCT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_199678 agamous-like MADS-box protein AGL80 [Arabidopsis thaliana] | 290 | 4e-024 |
| XP_002318922 predicted protein [Populus trichocarpa] | 270 | 9e-022 |
| XP_002329991 predicted protein [Populus trichocarpa] | 270 | 9e-022 |
| XP_002520092 mads box protein, putative [Ricinus communis] | 269 | 1e-021 |
| XP_002512584 mads box protein, putative [Ricinus communis] | 268 | 2e-021 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FJK3 Agamous-like MADS-box protein AGL80 | 290 | 2e-025 |
| Q7XJK5 Agamous-like MADS-box protein AGL90 | 216 | 7e-017 |
| Q7XJK6 Agamous-like MADS-box protein AGL36 | 214 | 1e-016 |
| Q7XJK8 MADS-box transcription factor PHERES 2 | 207 | 8e-016 |
| O80805 MADS-box transcription factor PHERES 1 | 203 | 2e-015 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9I6C3 Predicted protein (Fragment) | 270 | 6e-022 |
| B9N410 Predicted protein (Fragment) | 270 | 6e-022 |
| B9S273 Mads box protein, putative | 269 | 8e-022 |
| B9RFR5 Mads box protein, putative | 268 | 1e-021 |
| A5BJU9 Putative uncharacterized protein | 265 | 2e-021 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G48670.1 AGL80 (AGAMOUS-LIKE 80); DNA binding / transcription factor | 290 | 2e-026 |
| AT5G27810.1 sequence-specific DNA binding / transcription factor | 245 | 3e-021 |
| AT5G26630.1 MADS-box protein (AGL35) | 234 | 5e-020 |
| AT5G27960.1 MADS-box protein (AGL90) | 216 | 7e-018 |
| AT5G26650.1 AGL36 (AGAMOUS-LIKE 36); DNA binding / transcription factor | 214 | 1e-017 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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