Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN37640

FASTA Sequence
Unigene ID: UN37640Length: 1104 SSR 
GGGACTGATTGCGTCAGCAGACATAGCTTCCAACGTTGTCTCTCTCTGTGGAATCGAATCTTTAATGGAAGAAAGCTCATCGGAAG
AGACGTGCGACATATGGGAAGATTACTTCCGATTCTGTAAAAGACCTAGAGAGGAGGTGGATACGATAAGCAAGCTACCAGATTCT
CTCATCTCTCAGATACTCTCCCATCTCCCGACCACAAAGGAAGCCGTTCGAACCAGCCTTCTCTCCAAACGGTGGAAAACTCTCTA
CCTTTCGATCCCCGCGTTGACTCTGAACGCTAACGAGTTCCCAAATCACAACGCCTTCGTTAGTTTCATCGATAGGTTCCTCGATT
TCTCTAGAGAACAGAACTCGATCCTACACAGGCTGAAGCTAAGTGTTCGAAAGAAGAACGTGGATGATTCTCCTCCCTGCGTCACG
CGGTGGATAGACTCTGTGTCTTCGTCCAAACTTAACCATCTCTACGTCGAGTGTCTCGTGAACCGTAAGTTTCTAGAAGCGATTCC
CCGGAGTCTATACGTATGCTGCGACACTTTAGTGTATCTAAGACTCCATCGTGTCTCGTTTGGCGAGTTTGAGTCTGTGTCTTTAC
CTTGTCTCAAGAAAATGGTGTTAGAACACAATGTATACGCAAACGACGCCAGCCTGGAGCTGTTTATCTCGTCTTGCTCTGTTCTT
GAGGATCTGAGCATTGTTAGAATGGCACCTGATAAGATCAAGGTTTTACGTGTGTGCTCTCAGTCCTCGACGAGTCTTCATATAGA
CTATTTGTTAGGTGAAGGCGATGACTTTGATGATGAGGGTTTCGAGAGAGATGGCTCAGGAGTTTTCATTGATTCTCCTAAACTCG
AGTTCTTGAAGTTCGAAGAAGATCTATCTGATACTAAAATAATTACCAATACAGGGTCCTTGGCCAAGGTCAACCTTGTTTTTATT
TTCGGTGAGAATGATACTGCTGATGTAATCGAGTTACCAAAGCGAGATAAGCGAGATATGATCCGTAACTTCTTTACTAGCATCTC
TCGTGTTACTGATTTGAAGCTCTCTGAGCATATTGTGGAGGTATATATATATATATATAGCTTTGTGAAAAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAB11679 unnamed protein product [Arabidopsis thaliana]9341e-098
NP_197665 FBD-associated F-box protein [Arabidopsis thaliana]9341e-098
Q9FNI9 RecName: Full=Putative FBD-associated F-box protein At5g227207281e-074
NP_197664 putative FBD-associated F-box protein [Arabidopsis thaliana]7281e-074
NP_001190368 putative FBD-associated F-box protein [Arabidopsis thaliana]7281e-074

Swiss-Prot top hits (Blast detail)Scoree value
Q9FNI8 FBD-associated F-box protein At5g227309346e-100
Q9FNI9 Putative FBD-associated F-box protein At5g227207285e-076
Q9FI16 FBD-associated F-box protein At5g444907133e-074
Q9FNK0 Putative F-box/FBD/LRR-repeat protein At5g226106514e-067
Q9FNJ4 Putative F-box/FBD/LRR-repeat protein At5g226705109e-051

TrEMBL top hits (Blast detail)Scoree value
A8MSB2 Uncharacterized protein At5g22660.14482e-042
Q9FNK1 Genomic DNA, chromosome 5, P1 clone:MDJ224071e-037
Q1PDU4 Putative uncharacterized protein3721e-033
A0MEF3 Putative uncharacterized protein (Fragment)3424e-030
A5BLF6 Putative uncharacterized protein2762e-022

Arabidopsis top hits (Blast detail)Scoree value
AT5G22730.1 F-box family protein9345e-101
AT5G22720.1 F-box family protein7284e-077
AT5G44490.1 F-box family protein5725e-059
AT5G22670.1 F-box family protein5108e-052
AT5G22610.1 F-box family protein5072e-051

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  100%

Unigene MembersMember information