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Information for unigene UN37643

FASTA Sequence
Unigene ID: UN37643Length: 990 SSR 
GGGGAAAAAAATTTACTGCCTCTCAAAAACCTAACATGCATCAATCCGCCATCAAAGGTCTGGAGTTGAACTGTCGTGATGCAGAT
ATTCGAAAAAGCAGCATTAGCAGGATTTCGGTCGAGGGATACGACACCTCCCTTCGTAGGGCAGATGTCGATGGTGCTTTGAGAGA
ACACTTCGCTTCATGTGGAAACATAATACATGTTTATGTTCCCGTTCCCTTAGACGTAGACGTTACCGGTGTTATTCTCTGCAGAT
ATTCCTTAATTTATGTTAATGAAGAAGATGAAGAAAAGGCACTGAAGCTTGGTGGAAGTGACATGGGAGGACGGATTTTACAAATT
AACCCTTACCCGTTCCACGAAAATCACCTTGATGATTACTTGGCTCCTATGAAAGAAGGCGAATTCTTTCTGCCACAACACACGAT
AATGGTTAAGGATTTTGAGTCTTCCCTTCCTATCGATGTTATCAAGGCGCAGGTTGAGAAATATTTCTCTGCAAAAGGTTCTTTTG
TTTACCAAGACGTAACCGCTTCTGGTGCTATCAAAACCGTAGCCAGATTTTATGTCCGTGGACAAGAGGGTGTAGAAACGGCGCTT
GAACGTAGTGGACGTTCTGTTGAAGGTTTGTATTTTGTAGTTACTGAGGTTGTTCCAGTTCCAGCAAAAATACGCCCGACTGGCTA
CTGTCACCCACATAACTTTATAGAAGATCCAAATATTACGGAGAAGAGAAGTCAGAAGAAGAAGAAGAGCAAGACTACAGAGAGAA
ATCAGTCGAAGAAGAAAGAGAAGAAGAGGAAGACCAGGGTGGGATATCAGAAGAAGATGAAGAGTGAGAGTAGGGAGTAGAAATCT
GTTTCTTATGAGAAGACATGCTTTTTATTATATCAACTTGTGTGTAATGCAACCCGTTCTTTTCTTTTTCTTCTGGATATTGAATG
TGTTATGTTGTTTTTGTGTGGATGTTTAGCAACTCAAGACTTTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002893783 predicted protein [Arabidopsis lyrata subsp. lyrata]2816e-023
BAB09542 unnamed protein product [Arabidopsis thaliana]2548e-020
NP_001078524 RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis thaliana]2467e-019
XP_002864221 predicted protein [Arabidopsis lyrata subsp. lyrata]2467e-019
XP_002873095 predicted protein [Arabidopsis lyrata subsp. lyrata]1983e-013

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q5BPG8 Putative uncharacterized protein2662e-021
Q5XUZ6 Putative uncharacterized protein2653e-021
Q9FI06 Emb|CAB83308.12546e-020
Q67YA0 Putative uncharacterized protein At5g035002465e-019
Q9LZD9 Putative uncharacterized protein F12E4_2501873e-012

Arabidopsis top hits (Blast detail)Scoree value
AT5G53700.1 INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: nucleic acid binding / nucleotide binding (TAIR:AT5G03480.1); Has 74 Blast hits to 54 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 68; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).2661e-023
AT5G03495.1 nucleotide binding2463e-021
AT5G03480.1 nucleic acid binding / nucleotide binding1872e-014
AT3G09160.1 RNA recognition motif (RRM)-containing protein1657e-012
AT1G48920.1 ATNUC-L1; nucleic acid binding / nucleotide binding1495e-010

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  100%

Unigene MembersMember information