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Information for unigene UN37752
| FASTA Sequence |
| Unigene ID: UN37752 | Length: 1424 |
SSR | | GGTAGAATAGTTTATGAGCTCCACAATAAGGCTATGGTATCAATACAAAGAGAAAATTGCATTTACAAAGTGACTTCCACATTGTT
GTATACAGCATAGAACAACACAAGAAATCTGAGCTTCTGTTTTCTTATATTTGTCAAAGCGAATATGCAGTCTTATAACGTCCAAA
TGGACTCCACCAATACAAAATTGAGAAAAAAAAACTATAACCTTCCCTTCTTTTTAAGACCTCCAACTCTAATCAGTAAGGTAATG
AAGCTGAAAACATATTCATCAGCAGCTGAATGGTTTGGTTGGGGAAATGGAAACATGTTCCGTATATGCCATGCTTTAAAAGCCTA
ATCATCATCCTCTGAATCGGATCTTATGTCTTCTCCAACTTTTCCTCTGTTTTTAAGTAGTCTTACAATCATGGCGCATATGAGAT
ACCACCAGTATATGTGGAAAACAAGAAGCATTAGTAACATTGTGTTGAAGGAATAGTACATGATGGTGCCTTCAAGTGATGTCATG
TCCAAATAATCCAGGAGTTCAATGCTTGTGGCCCTTATGATCCAAAATGGAAAGTAAATCAATCGTAGCAATAGCCAGGAGACAGC
AAAAAGTGCAAAACACACACTTGCTCCAAATTCCTTTTCAGAGTACTTGAAAATTTTAGCAGTTTCCATAAAAACGTCACTTGCAT
CATGAAGGGCTAGGATGATAGCTCCAATCTGGAAAAAGCTGGTAAGGTATGAGTAGGCAATGAGGATGATAGTGATGACATGGTGA
GACATCATAACAGCAAAATCCTTTCTTCTGGTCTCCCATGCAAGCAAGGCAGCAACACCATACACATAGAAACCGCACTGGCACAT
ATAGTAAAGCTTTATTGGAAGCTTGAGGTCTTGGTTAGGCCAACCGCGAAAGAAGAGTTTAATATCAGTGGCCCAAGGCTCGTGAT
AAAGGGCATTGAGAACGAAAACCTCACAAGCACCAAAGTAGAGCAGTTTCCAGAGAGACTCCTTGCATTTGATGAGCTTTGCACGA
GTAGCAGCATCCTTCATTTTAATCGGCGTAGAACCAGTAGTCAAAAGCCATACAGCTATCCTTTGAAAGACGAATCTATCGAGGAA
GAGCCTCAAAAAGAAGAATCCGAAGGCGAAATAGACTGCAATCTGGAAATGCCATGCCGCGATCGACGATGGTTCTAGCTTCATTA
CGCCGCCGCCGCTGGAATATACGGATTCCATGTCGAAATCGCCGGAGGAGACACTCTTTCTTTCTTCCTTTCTTTCTTTCACCTAG
AAATCATCAATCGTATCTTTCCGAAGAACAAAACGAGCAGAGCACTACGCCGGAGCTGGTTTACGCGATGGCGGAATCGATCAGAA
ATTTGGTTGGACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATTCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_188557 LAG1 longevity assurance homolog 2 [Arabidopsis thaliana] | 1375 | 1e-149 |
| AAF66103 LAG1 homolog 2 [Arabidopsis thaliana] | 1363 | 4e-148 |
| XP_002885303 hypothetical protein ARALYDRAFT_318682 [Arabidopsis lyrata subsp. lyrata] | 1347 | 3e-146 |
| CBI32408 unnamed protein product [Vitis vinifera] | 1013 | 1e-107 |
| XP_002518765 longevity assurance factor, putative [Ricinus communis] | 998 | 8e-106 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LJK3 LAG1 longevity assurance homolog 2 | 1375 | 6e-151 |
| Q84QC0 ASC1-like protein 3 | 873 | 1e-092 |
| Q6NQI8 LAG1 longevity assurance homolog 3 | 689 | 2e-071 |
| Q6EUN0 ASC1-like protein 1 | 669 | 5e-069 |
| Q8W4Y5 ASC1-like protein | 639 | 1e-065 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RYI1 Longevity assurance factor, putative | 998 | 5e-106 |
| B9N4Y1 Predicted protein | 972 | 5e-103 |
| A9NUL2 Putative uncharacterized protein | 914 | 3e-096 |
| B9HS09 Predicted protein | 879 | 3e-092 |
| Q10NP1 Longevity-assurance protein containing protein, expressed | 873 | 2e-091 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G19260.1 LOH2 (LAG ONE HOMOLOGUE 2) | 1375 | 5e-152 |
| AT1G13580.2 LAG13 (LAG1 LONGEVITY ASSURANCE HOMOLOG 3) | 689 | 2e-072 |
| AT3G25540.1 LAG1 | 614 | 1e-063 |
| AT1G26200.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: Longevity assurance, LAG1/LAC1 (InterPro:IPR016439), TRAM, LAG1 and CLN8 homology (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: LAG13 (LAG1 LONGEVITY ASSURANCE HOMOLOG 3) (TAIR:AT1G13580.2). | 603 | 2e-062 |
| AT1G13580.1 LAG13 (LAG1 LONGEVITY ASSURANCE HOMOLOG 3) | 510 | 1e-051 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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