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Information for unigene UN37798
| FASTA Sequence |
| Unigene ID: UN37798 | Length: 1252 |
SSR | | GTCAGCAAACATCTTCAAAACGCTAAACCCACAGCCACGCGAGAACAAAGTCATCGACGCTTTAGACCTCGAGGAGGAAGAGCCTT
CCATGGACCTCGCCTGGCCTCACTTGCAGCTCGTCTACGAGCTTTTCCTGAGGTTCGTTGCTTCTCCTGAGACTGGCACCAAGCTG
GCCAAAAGATACATAGACCAATCCTTCGTCCTGAGGTTACTAGACCTGTTTGACTCAGAGGATCCTAGAGAGAGAGACTGCCTCAA
AACAATCCTCCACCGGATCTACGGTAAATTCATGGTCCACCGTCCTTTCATCAGGAAGTCGATAAACAACATCTTCTACAGGTTCG
TCTTCGAGACAGAGAAACACAACGGGATCGCCGAGTTTCTTGAAATCTTGGGAAGTATAATCAACGGTTTTGCTCTTCCTTTGAAA
GAAGAGCACAAAGTGTTTCTCGTTCGGGTTTTGATACCGCTCCCCCAAACCGAAAGGGTTGCAGATGTATCACCAGCAGTTGTCTT
ATTGCATCACGCAGTTTGTGGAGAAGGATTGCAAACTCGCTGATACGGTTATAAGAGGGTTGCTCAAGTACTGGCCCGTGACGAAT
AGTTCTAAAGAAGTCATGTTTCTGAATGAGCTGGAGGAAGTGCTTGAAGCGACGCAGCCTCCGGAGTTCCAGCGGTGTATGGTGCC
GCTCTTTCGCCAGATAGCTCGGTGTTTGAACAGCCTGCATTTTCAGGTTGCAGAGAGAGCTTTATTCTTATGGAGCAACAATCACA
TAGAGAATCTGATAATGCAGAGCCGCAAAGTCATTCTCCCAATTATATTCCCTGCGTTGGAGAGAAACGCACAGAAACATTGGAAC
CAAGCTGTTCATAGCTTGGCGCTAAACGTGAGGAAGATATTCCAAGACCTGGACCCTGAGCTGTTCAAGGAATGCCTCGCTAAGTT
CAAAGAAGACGAATCAAAGGAAGGTGAGACCAAGGCCAAACGTGAGGCCACTTGGAAACGGTTGGAAGAAGTTGGAATGCGAAAAG
GGTAAATGAGATTTAGAGCTATAGAGGATTGTGACATCATCAATTCAGGAGAAAAGTTTCAATATTTGGGTCTCTTCTTCTTCTTC
TTCTTCCAAGTTCCCATTATTATTATTATAATATTTTTTTTGTTTCCTGTAAAATCTTCTTGTTAATTGTTTTTTTTGTTGTTGTT
GCTACATTGTCTATGTTCCCACGTTCTTGAGACTGTCTTTGTTCATTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_189231 protein phosphatase 2A regulatory subunit B' eta [Arabidopsis thaliana] | 925 | 2e-097 |
| XP_002875297 hypothetical protein ARALYDRAFT_904782 [Arabidopsis lyrata subsp. lyrata] | 912 | 6e-096 |
| XP_002890006 hypothetical protein ARALYDRAFT_471504 [Arabidopsis lyrata subsp. lyrata] | 882 | 2e-092 |
| NP_172803 protein phosphatase 2 (formerly 2A), regulatory subunit B' [Arabidopsis thaliana] | 881 | 2e-092 |
| AAM61625 B regulatory subunit of protein phosphatase 2A, putative [Arabidopsis thaliana] | 881 | 2e-092 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LU89 Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' eta isoform | 925 | 8e-099 |
| Q8LF36 Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform | 881 | 1e-093 |
| Q8RW96 Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform | 737 | 5e-077 |
| Q9LVE2 Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' zeta isoform | 719 | 6e-075 |
| O04376 Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform | 689 | 2e-071 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9DH07 AT3G26020 protein | 925 | 1e-097 |
| Q0V836 At1g13460 | 881 | 2e-092 |
| A5BUF9 Putative uncharacterized protein | 819 | 3e-085 |
| B9RMK5 Protein phosphatase 2a, regulatory subunit, putative | 812 | 2e-084 |
| B9IJK7 Predicted protein | 803 | 2e-083 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT3G26020.1 serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative | 925 | 7e-100 |
| AT3G26020.2 serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative | 925 | 7e-100 |
| AT1G13460.1 serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative | 881 | 9e-095 |
| AT1G13460.2 serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative | 881 | 9e-095 |
| AT3G26020.3 serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative | 752 | 8e-080 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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