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Information for unigene UN37821
| FASTA Sequence |
| Unigene ID: UN37821 | Length: 1491 |
SSR | | GGAAAGTTCTGGGCTTTTCTCTCTCTCTCTCTGTCTCTCGCTTTCGAGATCAATCGAAAGGAAGAATCATCGGAAGAAGAAGAAAG
AGAAGCTAATGGGTTGGATCCCGTGCTCTGGGAAATCAAATGGGAAGACTAAGAAAAGGAGCAACAGTGACGCAAAGCTCAGCAGG
AATTGCTCTGTCTCTACTTCAGAGAAATCTAAGGCCAAATCGTCAGTGAGTGAATCCAAAAGCAGAGGGTCTGATAACATTGTTGC
ACAGACGTTTACGTTCTCTGAGCTAGCTACTGCCACTAGAAACTTCAGGAAAGAATGCCTTATCGGGGAAGGAGGATTCGGTAGAG
TTTACAAAGGTTACTTAGCAACCACTAGCCAGACAGCGGCTATCAAGCAACTTGATCATAATGGTTTACAAGGAAACAGAGAGTTC
CTCGTTGAGGTTCTCATGTTGAGCCTTCTTCATCACCCAAATCTTGTGAACCTCATTGGGTATTGTGCTGATGGGGATCAAAGTCT
TCTCGTCTACGAATACATGCCTCTAGGTTCACTTGAAGATCATTTGCACGACATTTCACCTGGTAACCAGCCACTTGACTGGAACA
CAAGGATGAAAATAGCTGCAGGTGCTGCTAAAGGGTTGGAGTATCTGCACGACAAGACCATGCCTCCAGTGATCTACCGTGATTTG
AAATGCTCCAGCATTTTGCTCGGCGATGACTACTTCCCGAAGCTATCTGACTTCGGTTTGGCTAAACTTGGCCCAGTGGGTGACAA
GTCTCACGTGTCCACTCGTGTTATGGGAACATACGGATACTGTGCTCCCGAGTACGCAATGACAGGCCAGCTAACACTCAAGTCAG
ACGTTTACAGCTTCGGTGTGGTTCTTCTGGAGATTATAACCGGTAGGAAAGCCATAGACAATTCTAGATGTACTGGAGAACAGAAT
CTGGTCGCGTGGGCGAGGCCTCTGTTTAAAGACAGGAGGAAATTCTCTCATATGGCTGATCCAATGCTTCAAGGTCAATACCCTCC
GAGAGGATTGTACCAAGCCCTTGCCGTGGCGGCAATGTGCGTGCAAGAGCAGCCGAATCTGAGACCTGTCATTGCTGATGTTGTCA
CTGCACTCACTTATCTAGCTTCCCAAAAGTTTGATCCTATGGCTCAGCCAGTCCAAGGCTCACTTTTCGCTCCTGGGACTCCACCT
AGATCAAAGAGGGGGGTCTGAAAAGTAAATCTTAGTGCCGTGTGAGTTATTTACACTTTTAGACCGATTCCGAGCTGTCTTCTTCT
TTTTTTAAATCGGGATGGGTTTCAGACTAAGCATGAAAGGAGTTTGTTTGTAGATATGTGTAAGAAGAGTGATATTTCATATAGAA
GCCGGTTTGTAATGTTGTTGTTATAGGTAATGAGTCTTCACATGTAATGTAATGTTATGTAGCAACTGCTTTAAAAATGTGACAAT
ATTTTATTATATGGTATTATTCAGTAATG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| AAG16628 protein serine/threonine kinase BNK1 [Brassica napus] | 1878 | 7e-208 |
| NP_195900 protein kinase family protein [Arabidopsis thaliana] | 1827 | 6e-202 |
| CAB86034 protein kinase-like [Arabidopsis thaliana] | 1827 | 6e-202 |
| XP_002873066 kinase family protein [Arabidopsis lyrata subsp. lyrata] | 1822 | 2e-201 |
| XP_002276042 PREDICTED: hypothetical protein [Vitis vinifera] | 1536 | 3e-168 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FE20 Serine/threonine-protein kinase PBS1 | 1242 | 2e-135 |
| Q9LQQ8 Probable serine/threonine-protein kinase RLCKVII | 1230 | 4e-134 |
| O49839 Protein kinase 2A, chloroplastic | 828 | 2e-087 |
| O49840 Protein kinase 2B, chloroplastic | 826 | 3e-087 |
| P43293 Probable serine/threonine-protein kinase NAK | 682 | 2e-070 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FT24 Protein serine/threonine kinase BNK1 | 1878 | 5e-208 |
| Q0WRY5 Protein kinase like protein | 1827 | 4e-202 |
| Q9LZ05 Protein kinase-like | 1827 | 4e-202 |
| B7FLW1 Putative uncharacterized protein | 1532 | 7e-168 |
| C6ZRY1 Protein kinase-like protein | 1527 | 3e-167 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G02800.1 protein kinase family protein | 1827 | 2e-204 |
| AT5G18610.1 protein kinase family protein | 1380 | 2e-152 |
| AT5G13160.1 PBS1 (avrPphB susceptible 1); kinase/ protein serine/threonine kinase | 1242 | 2e-136 |
| AT1G07870.1 protein kinase family protein | 1230 | 4e-135 |
| AT2G28590.1 protein kinase family protein | 1157 | 1e-126 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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