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Information for unigene UN37870

FASTA Sequence
Unigene ID: UN37870Length: 1014 SSR 
GCAACCACAATCTCCACTCATAAAAAAAGGTTAGTGGAGGAGACGGTGGTGGTGGTGGTGGTGGTGGTGGTAGACAACATCATGAC
GGCACTGAAACTGATAGGAAGAAGAAACATTACCATCGTCACACCGCTCAACAGATTCAACGACTTGAATCGAGTTTCAAGGAGTA
TCCTCATCCAGATGATAAGCAGAGGAACCAAATTAGCAGGGAATTGGGTTTGGCTCCAAGACAAATCAAGTTCTGGTTCCAGAACA
GAAGAACTCAGCTTAAGGCGCAACATGAGAGGCATATAACAATGCACTAAAGGCAGAGAACAACAAGATTTGATGTGAGAACATAG
GCATTAGAGAAGCACTCAAGCATGCTATATGCCCTACTGTGGAGGTCCTCCCGTTAGTGAAGATCCTTACTTCGATGAGCATAAGC
TCCGGATCGAGAATACACATCTTAGAGACAAGCTTGAAAGAATGTCAACAGTTGCATCAAAGTACATGGGAAGACTAATCTCCTCC
TACCTCTCAACGCTACAGCCAATGCACATCTCACCGTTGGATCTGTCCATGACTGGTCCTTCACTGGATTTTGATCTTCTTCCAGG
GAGTTCTATGCATTCTCAGCATAATAACTTGGCTACTATATCAGGCATGGACAAGCCTCTTATGAACGACATTGCTTTGACTGCTA
CGGAAGAATTGCTTAGGCTTTTTAGCACAAACGAACCTCTCTGGACTAGAGCTGATCGATTGTGGCGACGGCAGAGACGTTCTCAG
TTTGATGCTCAGGTTTATATGTTTTTTAGAGTTTGACTATGCAATCGGTGCTGGTTGATGCTTCCTCAGTAACTAAGTTGCTCAAA
TAATAGTCTGTTAGTTACGATCATGAAAAGCAACAACATCGTGATCTTTAGGTTCTCAATTGTGCATGTATAATAGTACTTGACTT
CAGAAGATTATAGAAGATTATAAAGAGACTGTCAGATTTTTGAAGAATGATGAAATCAGTTTATGGCA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ABA70759 baby boom interacting protein 1B [Brassica napus]5683e-056
ABA54874 baby boom interacting protein 1A [Brassica napus]5658e-056
NP_177479 homeobox-leucine zipper protein HDG11 [Arabidopsis thaliana]4062e-037
XP_002317722 predicted protein [Populus trichocarpa]3552e-031
CAN83483 hypothetical protein VITISV_009450 [Vitis vinifera]3382e-029

Swiss-Prot top hits (Blast detail)Scoree value
Q9FX31 Homeobox-leucine zipper protein HDG114069e-039
Q9LMT8 Homeobox-leucine zipper protein HDG123728e-035
A2YR02 Homeobox-leucine zipper protein ROC73092e-027
A3BPF2 Homeobox-leucine zipper protein ROC73082e-027
Q7Y0V9 Homeobox-leucine zipper protein ROC42841e-024

TrEMBL top hits (Blast detail)Scoree value
Q0H743 Baby boom interacting protein 1B (Fragment)5682e-056
Q0H8F7 Baby boom interacting protein 1A5655e-056
B9I4X3 Predicted protein3551e-031
A5BQ38 Putative uncharacterized protein3381e-029
B9N3B2 Predicted protein3371e-029

Arabidopsis top hits (Blast detail)Scoree value
AT1G73360.1 HDG11 (HOMEODOMAIN GLABROUS 11); DNA binding / transcription factor4068e-040
AT1G17920.1 HDG12 (HOMEODOMAIN GLABROUS 12); transcription factor3727e-036
AT4G21750.1 ATML1 (MERISTEM LAYER 1); DNA binding / sequence-specific DNA binding / transcription factor2761e-024
AT4G21750.2 ATML1 (MERISTEM LAYER 1); DNA binding / sequence-specific DNA binding / transcription factor2761e-024
AT4G04890.1 PDF2 (PROTODERMAL FACTOR 2); DNA binding / transcription factor2705e-024

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
101  33%
 
122  67%

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