 |
Information for unigene UN37877
| FASTA Sequence |
| Unigene ID: UN37877 | Length: 1165 |
SSR | | ACGATTCATGATCATCAATCAATCAAAACTGCTAAAAGCCACATGAGTTCTTATCTAAAAACAGAGGAAAAACAGAGAGAACACAC
ATTACTAACCTGAACTGAAACAAAACTCCAAAGTCAAAAACAGAGTTCAGACCAGACTTTTCAAATGTTTTCACAGCTACAAAGTT
TACTAAAGTGACCAAACACCGCTATCACCTCACTGCTTCTCAACTTTGTAACTAGACCCCACGAGAACATTATCAGAAACCATAGT
AATCTACACCAGCAGAAACAGATCAGATGAGGAACTGAGAGTTCATGTCGTTTCTTAGGTCCTTTCTTGGCTCTTGCTTGAGCTCT
CTCATCCAATCTCCTGATTCTCGGAGACAACCCACATAAATAGTCTCGTGCTTTGTTTCCTTCACCCGAAAGCCCATTTAAGTTCT
CTATCTTCCACCTACCAACCAAAAACTCAAGAATGTCCGCGTAGTCTTTAGCAGTGTAAACACCTAATCTCTGAGCCACAGACGAG
AAGTTGTCAAAGAGGTTGTCGTCGCGTCCATCGTACATCAAGTGAGCCGGCATCGAGATTTTCTTCTGTGATCATGTCTCCCACCA
AAACAACAAAGTAGTCATCAGGGAGCTCTCTCGCCCTCTCTCTTAGCTCTCTCACCTGATCTTCAAACCCGTCGGACGCAGGGTCG
GGTAGGAAATCTTGGGGCTGCCACGACTTTTCGACGTCTTTGAGGTGAATTAAGAGGTTCTGCTCGGCCCAGTCTTCCATGGATTT
GAAGATCTCGATCTTCTGGGGTGGCATGGAGTGCAAGACTTGAACGTGCACTTCCTTAGGTGGAGTGAATGGCTTCTTCAAACTCT
CAACATCCTTGGCGCCAAGAGCAGGAGAAGAAGAAGAAGAAGCGAGGCAGAGGAGCTTGGGAGATCTGAATGTAGAGATTGGCGGA
CGAGCCGAGGAAGAGAATCTGTAGGGGTGAGTAGATGCCAAAAGGTTTAGCTTCAAAGCCATTTCCTTTCACAGACGATCGAGCTA
GCTCTCTCTCTCTCTCTCTCTAGGCTAGTGGTGCTCTATGGTTCCGTTTTCTCTTAAGGTTCAGTCCCGTCCACAGAAAGGGAGAT
GCCTTTATGAAATAACAGCCGCCGAAGAGAAGACTCTCTTACTCTCC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002880063 hypothetical protein ARALYDRAFT_903770 [Arabidopsis lyrata subsp. lyrata] | 659 | 1e-066 |
| AAD40245 plastidic delta-9-stearoyl-acyl-acyl carrier protein desaturase [Brassica juncea] | 652 | 8e-066 |
| ABS86960 delta-9-stearoyl-acyl-carrier-protein desaturase [Descurainia sophia] | 652 | 8e-066 |
| BAJ34062 unnamed protein product [Thellungiella halophila] | 651 | 1e-065 |
| CAA63746 acyl-[acyl-carrier protein] desaturase [Arabidopsis thaliana] | 643 | 9e-065 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P29108 Acyl-[acyl-carrier-protein] desaturase, chloroplastic | 642 | 5e-066 |
| Q01771 Acyl-[acyl-carrier-protein] desaturase, seed specific, chloroplastic | 623 | 8e-064 |
| P22337 Acyl-[acyl-carrier-protein] desaturase, chloroplastic | 493 | 9e-049 |
| Q42807 Acyl-[acyl-carrier-protein] desaturase, chloroplastic | 482 | 2e-047 |
| P32061 Acyl-[acyl-carrier-protein] desaturase, chloroplastic | 457 | 1e-044 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B4X944 Acyl-[acyl-carrier-protein] desaturase | 652 | 5e-066 |
| Q9XQR7 Acyl-[acyl-carrier-protein] desaturase | 652 | 5e-066 |
| Q42591 Acyl-[acyl-carrier-protein] desaturase | 643 | 6e-065 |
| Q39355 Acyl-[acyl-carrier-protein] desaturase | 642 | 8e-065 |
| O22832 Acyl-[acyl-carrier-protein] desaturase | 641 | 1e-064 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G43710.1 SSI2; acyl-[acyl-carrier-protein] desaturase/ stearoyl-CoA 9-desaturase | 641 | 6e-067 |
| AT2G43710.2 SSI2; acyl-[acyl-carrier-protein] desaturase/ stearoyl-CoA 9-desaturase | 639 | 9e-067 |
| AT3G02630.1 acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative | 388 | 1e-037 |
| AT5G16240.1 acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative | 366 | 4e-035 |
| AT1G43800.1 acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative | 348 | 5e-033 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
