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Information for unigene UN37944
| FASTA Sequence |
| Unigene ID: UN37944 | Length: 1363 |
SSR | | GGGTCATTTCCAAAAATACACACAGGACAGAACAGAAGAGAAGAGGAGAGGAGAGAAGAAACAAAACCGAACTCTTCAAACTCGAG
AGAAAGGTGCAAAACCTACGAGAAAGCGAGAGAGAACTAAACTAATCGAATCTGGTGGAACAATGGCTAATTTGCCTCCATCTCTC
TCCATGGGCACTCCTTTCGGTGGTCCCAGCACGTCGGTCGGAGCTCCGGCGGCGAACAAAGATCGAAACTTGGCATCGGCAGAGCA
GTTGGTTCTCGATCTCAGCAATCCTGAACTCAGAGAAAATGCTCTTCTCGAGCTTTCCAAGAAAAGAGAACTGTTTCAGGATTTGG
CGCCTCTCTTGTGGAACTCTTTCGGTACCATTGCCGCCTTGTTACAGGAGATGGTGTCAATCTACTCTGTTCTCGCACCTCCGAAT
CTGACTCCTGCTCAGTCCAACCGTGTTTGCAACTCACTCGCCCTTCTTCAGTGCGTAGCATCTCATTCCGACACGAGGATGTTATT
TCTCAAGGCTCACATCCCATTGTACCTTTATCCCTTCCTGAATGCAACGAGTAAGTCAAGACCTTTCGAATACTTGCGCCTTACTA
GCTTAGGTGTCATTGGTGCTCTTGTCAAGGTACAACCCATCCTCTCCCTTTGCTCTAAAAATTCTTGGTTTCTGAATGAATGGGGT
TATCTTTCTTTTAGCTAAGTTAGTGTATGAAATAAGGAAAGATCCTTTCACTCTGTTACCCCAGGTTGATGACACAGAGGTCATTA
GCTTCCTTCTTTCAACTGGAATTATTCCTCTGTGCCTCCGCACCATGGAGATGGGGAGTGAGCTGTCCAAAACTGTTGCGACATTC
ATAGTTCAAAAGATCTTGTTGGATGACGTGGGGATGGATTACATCTGCACTACAGCAGAGCGTTTTTTTGCTGTTGTTAGAGTGTT
GGGAAATATGGTTCAGTCACTCGTTGAGCAGCCTTCTCCACGCCTTTTGAAGCATATCATTCGTTGTTACCTCCGTTTATCTGACA
ACCCAAGGGCTTGTGCTGCACTCGGAAGCTGTCTCCCTGACTCGCTACGAGATGGGACCTTCAGCAATTGTCTTCGCGAGGATCAA
ATCGCGAGGAGGTGGCTGCAACAGCTGGTTCACAATGTTGGAGTTGGTCGAGTCCCATCACATCAAGGTGGAGGATTTGAGCACAT
GCTCTGAGATGCTGAATTCATCTCAGCCTATCTTTGTATTGCTTTTTTTGTTTGTTTGTTTGTTTGTTTCTAATTTATTCATGTAC
TTTTGATGCCTTAACTTGGATGATGTGTGTTATAGGCTCTTTTAATCTGTTTGAAATTTTCTACTTTTTGTAA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_188716 CCR4-NOT transcription complex subunit 9 [Arabidopsis thaliana] | 763 | 1e-078 |
| XP_002885405 hypothetical protein ARALYDRAFT_479606 [Arabidopsis lyrata subsp. lyrata] | 763 | 1e-078 |
| AAM61591 putative cell differentiation protein [Arabidopsis thaliana] | 757 | 6e-078 |
| BAB02488 RCD1 [Arabidopsis thaliana] | 751 | 3e-077 |
| XP_002317325 predicted protein [Populus trichocarpa] | 710 | 2e-072 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q6IP65 Cell differentiation protein RCD1 homolog | 481 | 3e-047 |
| Q6P819 Cell differentiation protein RCD1 homolog | 481 | 3e-047 |
| A7MB47 Cell differentiation protein RCD1 homolog | 480 | 4e-047 |
| Q4R347 Cell differentiation protein RCD1 homolog | 480 | 4e-047 |
| Q9JKY0 Cell differentiation protein RCD1 homolog | 480 | 4e-047 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8RWV5 Putative cell differentiation protein | 763 | 9e-079 |
| Q8LF62 Putative cell differentiation protein | 757 | 4e-078 |
| Q9LT41 RCD1 | 751 | 2e-077 |
| B9I150 Predicted protein | 710 | 1e-072 |
| B9STZ0 Cell differentiation protein rcd1, putative | 700 | 2e-071 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G20800.1 rcd1-like cell differentiation protein, putative | 763 | 5e-081 |
| AT5G12980.1 rcd1-like cell differentiation protein, putative | 610 | 3e-063 |
| AT2G32550.1 rcd1-like cell differentiation family protein | 200 | 9e-016 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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