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Information for unigene UN37960
| FASTA Sequence |
| Unigene ID: UN37960 | Length: 1423 |
SSR | | GGCATCCAAACTTATCTTTCTCATTTACTTCTTCTTCTTCTTCTTCTTCTTCTCCTCAGCTTCCTTAATCTCACCAAACTTCCTCG
CATCCCAGATTCATCATGGCCACAACGTTGTTCAATGCCACTTGCAGCTTTCCATCGATCAAAGTAATCGATTGCAAGAGCTACGT
GGGTCTCAGATCGAACGTGAATCAAGTTCGAGTCGCTTCTCTTCCAGTTGCAACTTCTCAGCGACGCTCTCTTGTCGTGAGAGCCA
GCAACGGACACGCTAAGAAGCTCGGAAGAAGCGACGCTGAGTGTGAAGCAGACGTTGCTGCCGGCAACGTTCCTGAAGCTCCTCCG
GTTCCACCTAAACCGGCTGCTCCGGTTGGTACGCCGGTTATTCAGCCTCTCAATCTAAACAGAAGGCCACGGCGAAACCGTGCTTC
TCCTACTGTGAGAGCTGCTTTCCAGGAAACTGACATCTCCCCTGCTAATTTTGTCTACCCACTTTTCATTCATGAAGGTGAGGAGG
ACACGCCTATTGGAGCTATGCCCGGTTGCTACAGGCTTGGCTGGAGGCATGGCCTTTTACAAGAGGTTGCAAAGGCTAGAGCTGTT
GGTGTCAACAGCATCGTGTTGTTTCCCAAAGTCCCCGAGGCTTTGAAGAATCCTACAGGGGATGAGGCATACAACGACAATGGTCT
TGTGCCTAGAACAATCCGTCTTCTCAAAGACAAGTATCCTGATCTTATTATCTACACTGATGTTGCTCTGGATCCTTACTCATCCG
ACGGTCACGATGGTATAGTCAGAGAAGATGGTGTAATAATGAACGATGAAACTGTTCATCAGCTATGTAAGCAAGCTGTTTCTCAG
GCCCGAGCTGGAGCGGATGTTGTTAGTCCGAGTGATATGATGGATGGTCGAGTAGGCGCGATCCGTGCAGCTCTCGATGCTGAAGG
CTTTCAGAACGTTTCCATCATGTTTTACACCGCAAAGTACGCAAGTTCGTTTTACGGGCCCTACCGTGAAGCTTTGGACAAATTTC
CCTTGCCTATTGCTGCATACCAAGTGTTTGGGGAGTACTCGATGATCAAAGCTGGGGGAGTCCTGAAGATGATCGATGAGGAGAAA
GTGATGATGGAGTCGCTCATGTGCTTACGCAGAGCTGGTGCTGACATCATCCTCACCTACTTTGCTTTTCGAGCTGCTACTTACCT
ATGCAACCAGAGGCGGTAGTAGAAGAGACAGAGAGAGATAAGAGAGTTTACTGGTTTGCATTTGAGTATTAACCATTTGAGCAATC
ATGATTTTTTGCCTTGTACTACTTTTCCCTTGCAAATTTCATGTCCTTATCCAACTTTGTTTGGTCATGTTTCTTTGTATCACAAA
TGTGTTCCTCATTGATTTTTATTTAGAAGCATTGTTTTGAGTTTTGT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| AAK15323 aminolevulinate dehydratase [Raphanus sativus] | 1573 | 2e-172 |
| XP_002887254 hypothetical protein ARALYDRAFT_339208 [Arabidopsis lyrata subsp. lyrata] | 1470 | 1e-160 |
| NP_177132 delta-aminolevulinic acid dehydratase [Arabidopsis thaliana] | 1461 | 2e-159 |
| XP_002513746 porphobilinogen synthase, putative [Ricinus communis] | 1288 | 2e-139 |
| XP_002285863 PREDICTED: hypothetical protein [Vitis vinifera] | 1263 | 1e-136 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SFH9 Delta-aminolevulinic acid dehydratase, chloroplastic | 1461 | 7e-161 |
| P43210 Delta-aminolevulinic acid dehydratase, chloroplastic | 1141 | 9e-124 |
| P30124 Delta-aminolevulinic acid dehydratase, chloroplastic (Fragment) | 1130 | 2e-122 |
| P24493 Delta-aminolevulinic acid dehydratase, chloroplastic | 1098 | 8e-119 |
| Q5Z8V9 Delta-aminolevulinic acid dehydratase, chloroplastic | 1076 | 3e-116 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9ATH0 Delta-aminolevulinic acid dehydratase | 1573 | 1e-172 |
| B9RJ27 Delta-aminolevulinic acid dehydratase | 1288 | 1e-139 |
| A5B0X9 Delta-aminolevulinic acid dehydratase | 1263 | 1e-136 |
| B9GU28 Delta-aminolevulinic acid dehydratase | 1224 | 3e-132 |
| B7FJZ6 Delta-aminolevulinic acid dehydratase | 1139 | 2e-122 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G69740.1 HEMB1; catalytic/ metal ion binding / porphobilinogen synthase | 1461 | 6e-162 |
| AT1G69740.2 HEMB1; catalytic/ metal ion binding / porphobilinogen synthase | 1461 | 6e-162 |
| AT1G44318.1 hemb2; catalytic/ metal ion binding / porphobilinogen synthase | 885 | 4e-095 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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