Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN37969

FASTA Sequence
Unigene ID: UN37969Length: 1358 SSR 
ACAGATCGGAACGAAAGAAAAAAAACATTACCATTACAGAACTCGAATCGGGTTTCACTTGGGGTATAATGATGAGGTATCAGAGA
GTAAGCCCAGATGTTCTTCCCCTCACAAACGGAGCAAAGAAGCCTTACTTAAGACCTTCACCTTCAAGATCAACCCACGAAGACAC
CACCACCACCATTACACCCAACTCCATCGCCGGCAAAGGATTCAACGGCGGATCATTCACATCGCTAGACGGAGGAGGAGTGCGAA
TCAGATCCTCCCAGCAAACAGATCCCACCCCTACTACCAAGCGCGGCGGAGATGTGCTGTTACAGTGGGGACAGCGGAAGCGATCG
AGAGTCTCTAGAGCCGAGATCCGATCCTCCACCAACACCACCGCCGCCGCGGCTGCCGATGACTCTTCGTCTTCTTCGGGACATGG
GAAGATTCAGTCGAACAAGCTTTTAAGAAGATCTGTAAATCCGTCTATGCCTCCTCCACCACCACCTCCTCCTCATCCGGTTTCCT
CTAACCGGAGTTCGAACCATAGAAACGGTTTCGTCGGCGGCAAGGAAATCTTCCTTTCCAGGAATCAAGAAGATCGATCAGCCAAC
GGATCACCATCAAGGAACATCAATAACGGCCGTACGGTGTCCAGATCGGGAGTCTCAAAGCGATCTCCACCGTCTCCTGACCAAAT
CGAGAAGAGATCAAGCGTCAGAGATCATCATCATCAGAACCAGAGACAAAACGGGTTGGATCACAACCATAATCAACAGCATCAGA
GAGTGAGCAGATCAGAATCAATGGCTCACGCTCATCCAGAGCTGGAGACAAACAACAGTGGAGAGAGAGAGAAAGCAACGCATGTG
GAAGTCACAGAGTGGCCAAGGATCTACATTGCCTTGTCTAGGAAAGAGAAGGAAGAAGATTTCTTGGTTATGAAAGGCACAAAGCT
TCCTCATCGACCCAGGAAACGAGCTAAGAACATTGATAAATCCCTACAGTATTGTTTTCCAGGGCTGTGGTTATTTGATTTACCCA
AGAACCGTTATGATGTTAGGGAGAAGAAAAATGTGAAGAAGCAGCAGCAGAAACGGAGAGGGTTGAAAGGTATGGAGGACTTGGAC
ACCGACTCCGAGTAATATCTGGTTCTTACTTTCTATTTTTTTCTTTGTGGTTTTCGATTTTCTCTTTTTGAGAGGGGGATGAAGCA
CGTGTGGCTTTGCTTGTGATGCTCGTGCAAATGGGCCAACAAGAACCAGTGGAGCAAGAGCTATCGAGAAGCTCACCCTGTTTTAT
TTCCTATTTTTCTTAATCTTTATCCTTATTTTCCTCATTTTTTTCAGTTTATAAAAGTTCTTTTTTCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002869941 hypothetical protein ARALYDRAFT_914630 [Arabidopsis lyrata subsp. lyrata]12837e-139
NP_567597 uncharacterized protein [Arabidopsis thaliana]12569e-136
NP_849413 uncharacterized protein [Arabidopsis thaliana]11887e-128
CAA18257 putative protein [Arabidopsis thaliana]7003e-071
AAM63055 unknown [Arabidopsis thaliana]6546e-066

Swiss-Prot top hits (Blast detail)Scoree value
Q54PM6 Uncharacterized protein DDB_G02844591247e-006

TrEMBL top hits (Blast detail)Scoree value
Q8L603 Putative uncharacterized protein At4g2030012566e-136
Q3E7M4 Putative uncharacterized protein At4g20300.111885e-128
O65443 Putative uncharacterized protein AT4g203007002e-071
Q8LDR9 Putative uncharacterized protein6544e-066
B9T386 Putative uncharacterized protein5612e-055

Arabidopsis top hits (Blast detail)Scoree value
AT4G20300.2 unknown protein12672e-139
AT4G20300.1 unknown protein11937e-131
AT1G55340.1 unknown protein2582e-022
AT1G55340.2 unknown protein2582e-022
AT3G03880.1 unknown protein2537e-022

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
181  50%
 
91  50%

Unigene MembersMember information