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Information for unigene UN37977

FASTA Sequence
Unigene ID: UN37977Length: 777 SSR 
GGAAAGCTCAGTCCACAATTTCGATGATCCTTTGGCTCTGAGGATGGGATTTTATAACAGTAGTGCAGTGTTGAACTCCGCCTTCT
TCCCCTGTGTTAGTAGTGGAAGCCTCTACTTTAGTCCAAGAAGAAGAAGAACCCCATTCTTCTTTGTACAAGAATCTCTTCTTCGT
CGTCGTTTTTGTTGCAAATGCACTACGATCGTTGAAAAGAGCCCTAGAAGATTCAATTGGGTTGATCTGAATCATCATCATCATCA
AATTACAGAAGAACAAGAGGAGGCAATTAGTCGGATTCCTGTTAACATGTCTAAACGATGTCAAGCGCTTATGAAGCAGATAATAA
TTTGCTTGGAGGAAAAGGAGGATAGCTTTTGCTGCGATGATATGTTGGCTGCTTGGGTTAGGCGGATGAAACCCATTCGAGCTGAC
TGGCTTTCCCTTCTTAAACACCTCAACACTCTTGACTCTCCCTTTTATATCAAGGTGGCTGAATATGCGCTGCTCGAGGATTCTTT
TGAAGCCAACCCCCGTGATTATACCAAGATCATCCATTACTATGGCAAGCTTAACCAAATCCAAGACGCTGAGAAAACTCTTGTTG
CTATGAAAAACCGTGGCTTTCTCATTGATCAAGTCACTCTAACTGCCATGCTTCAGTCGTACAGCAAGGCAGGCTATCACCGCTTG
GCCGAAGACACTTTCAACGATGTCAAATTGCTTGGGGAGCAACTTGACTATCGTTCCTACGGTTCAATGATAATGGCCTACATTAG
AGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_171699 pentatricopeptide repeat-containing protein [Arabidopsis thaliana]7511e-077
XP_002892034 pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata]7483e-077
XP_002320730 predicted protein [Populus trichocarpa]5476e-054
XP_002273719 PREDICTED: hypothetical protein [Vitis vinifera]5432e-053
CBI38862 unnamed protein product [Vitis vinifera]5432e-053

Swiss-Prot top hits (Blast detail)Scoree value
Q9LPC4 Pentatricopeptide repeat-containing protein At1g019707516e-079

TrEMBL top hits (Blast detail)Scoree value
B9IC06 Predicted protein5474e-054
B9RDE2 Pentatricopeptide repeat-containing protein, putative4444e-042
C5X4T3 Putative uncharacterized protein Sb02g0420404166e-039
B4F8A3 Putative uncharacterized protein4094e-038
Q8H2U4 Os07g0661900 protein4051e-037

Arabidopsis top hits (Blast detail)Scoree value
AT1G01970.1 pentatricopeptide (PPR) repeat-containing protein7516e-080
AT1G19520.1 NFD5 (NUCLEAR FUSION DEFECTIVE 5)2767e-025

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  100%

Unigene MembersMember information