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Information for unigene UN38143
| FASTA Sequence |
| Unigene ID: UN38143 | Length: 1112 |
SSR | | CTCGCCTTTAATATACAGTTTACCATTACGATGTTGACAAGAAAAGAAGCAACTATGGGACTGGTGAAGGAGATGTTGTGGCTCGA
AGGAGTTGCTGCAAAAACCTAGCTGCTAGACGTTGCCCTACACCTCCTGCAACACGTCCTCCTAGTCTTCTTGCTTCCGGTTGTTG
CTAGTTTCCCGTCGATAAGGGCGAGGACGTCGGTGGTGATGAAGTCCACGTACTTGTTGATGAGTTTCCCAACTCCTCTGATGAGG
TAGAAGTCAAGACCAATGGCTTCTTCGATCCCGGGGCGTTGGACTTTGACAGCAACAACCTGACCCGAGTACCTCAGGTGGGCTTT
GTAAACCTGGCCAAAACTGGCTGCTGCGATTGGGTCGGGGGATATGTTGGAAAAAATGGATTCTAAAGACAAATCCAACTCTCTTT
CGATGCAAGCAAAGGCCTCTGCATCAGGGAAGGTTGGCAAAGCATCCTGAAGCTCAGCAAGCTCTTCGAGGTAATCGGGAGGACAG
AGGTCGGGTCGGGTGGATAAACCTTGACCCAACTTAACAAAAGTGGGCCCCAGACGAGTGAAGATCCTTCGGAGCTAACCGGCTCT
CTTCTTCATGTTCAGCTCTAGCTTCCCTTTCCTTTGATCAATCCCAAGCTTCAGAGCGAAGCCACCCAAAGCTGTCAATATCTCCA
CACTTCTCCGCAAAGCCTTGAGAGGCTGAGAGCCATGTTTCCTGGCGATAAGCTCCGGGGAATAAACAGAAGCGTCGACAGCACGA
CCAAGAGCACGCCCCTCCGCTTGAAGATCATCCGCGAGATCAGCACGTTTGTATTGTACAACAGGCGCAGGGGTTGGTCTTGACGA
GGATGAGGGAGGACTTGGGGCAGCTCCATCTTCCCCCCTGGGCCTAGCTTGAACAAGAGCTGCACAAGCTAGTCTCCTCCGATTCA
CAAAGAGAAACTTAGACTTTACACCTCGTCTTCTTGAATTGTCATCACCGAATAGAGTTAAACCCAGCGACTGGCCAAACACAAGA
CTCGTCATCGTTGTAAAACCAGAGAGAGAGAGAAGGAAGAAAGAATTTAAGATTGCTCCTCAGCCAGTAACGGCCATCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_565214 aarF domain-containing kinase [Arabidopsis thaliana] | 1157 | 2e-124 |
| XP_002889257 ABC1 family protein [Arabidopsis lyrata subsp. lyrata] | 1155 | 3e-124 |
| XP_002301879 predicted protein [Populus trichocarpa] | 828 | 3e-086 |
| XP_002523874 Ubiquinone biosynthesis protein coq-8, putative [Ricinus communis] | 804 | 2e-083 |
| XP_002263052 PREDICTED: hypothetical protein [Vitis vinifera] | 785 | 3e-081 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9MA15 Uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic | 1157 | 9e-126 |
| Q55680 Uncharacterized protein sll0005 | 392 | 4e-037 |
| Q94BU1 Uncharacterized aarF domain-containing protein kinase At1g71810, chloroplastic | 381 | 8e-036 |
| P73121 Uncharacterized protein slr1919 | 366 | 5e-034 |
| Q8RWG1 Uncharacterized aarF domain-containing protein kinase At4g31390, chloroplastic | 331 | 5e-030 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9GPJ6 Predicted protein | 828 | 2e-086 |
| B9SD05 Ubiquinone biosynthesis protein coq-8, putative | 804 | 1e-083 |
| C5YVQ8 Putative uncharacterized protein Sb09g011240 | 743 | 1e-076 |
| B6UDS6 Ubiquinone biosynthesis protein ubiB | 740 | 3e-076 |
| B8A2D4 Putative uncharacterized protein | 733 | 2e-075 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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