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Information for unigene UN38244

FASTA Sequence
Unigene ID: UN38244Length: 1682 SSR 
ACCAGATTATCATATATATATATAGAATACGTAATGATCCCTACAGTGTTTTGATTACATCCATTGACACTTTTATAATTTACCCT
AAGTACACAAACAATGTAAAAGATACACAAGCTGGGTCTGTGCAAATCTTAAAACAGGATAACGTACAGAACCTAGATACCAAAAA
CAATGGTCGGTGCAGCAGACAAAAATATCACCAAGAAACATTTGAACATATCTTCTTCTTCTGCACCACTCTTTTTTTTTCTCTTT
TTCTGCTGCTGCTGATGATGATGATGATATATTGGCCACTTATTTATGTTCCGTAATAACAATCCTGCAAAAAGAGTAGAGAGAGA
GCATAGTCCACCATCGATCTTGGGTACAACCTATGAGCCCTGATATGATTCTCTATATCTAAACCCCCCACGGCAAAAAGTCCATG
ACGTTGTTAGTTCGTAAACGCATATGCAGATCGTTTGTGGAGCTCATGGAGTCACCTTTACTTACATCAAATGCCGGGCTGTGCCC
TTCTGCAGCAGGACTGAAGCTGCTATCGTTGATGGAGTGTTGTTGGAGCAACTCTCCGGGACCACGGAATGTTGAAGTTGGAGAAG
ATAGACGTTTTTGGGACTCCATAGCTTCAACTTCCGCCAAAAGATCCGACACTGACTCGTCACACTCGTCGGGTCCGGTTACAATG
GGCCGCCAATCCGTGGTAGTAGAGGCAAAGTTGAATTTGAAGGTTGGACTAAAGAGATCTAGGAAGTCTATTTCTTGATTGTCTGT
GAAAGACACCAGACCGGAGTTCGAATCCCACACGTTTGAAGCAGTGCTTGGAGTAGCAGCATTCCAGTTCTGTCCGCATGACTGAA
CTGTAGCCGTGACTTGTTTCTCAGCCGCTCCGGTAAGGCCAATGTCGTTTTGATTGCAACCGTTCTTTACTGCCTCTGTTTGACCA
CCATTCCATCTTTCCTGTAGCGGCAGAGAGCAGTTTGAGGTTCCGGGGAGTGTAGACAGTGAAAGCGAACAGCTTATAGGGCTCTG
TCCAGGCAAGGGACTTTCGACTTTTGTTTTGTCCACACCCTCCCTTTCATTAGAAAGTGTGAAATCCAAATGGCTTTTGTTGCTAG
TATCCGAGCTCCTTGTGATGACACTGTTAACACTCTGGTCGGTGGACACTGAGTTGGGGCTGAAGTCAAGTACTCTAGTCTCTAAT
CTAGCAACAGCCACACTCTTGTTTTGGTCCTTAGCCGCCTCTTCCTGAAGAGGTACTGTTTTATGGAACTGCCCATTTAAGGCGTC
GGTCAGTAGTATGGAGCTCCTTTGCTGTTCACCCAACTTCCATATTCTCAGCTCAGGCGGGAAGTAACCACTTGCATTCCACTGTC
GCAGGTTCATTAAAGAAAACGGTCCATGAATCTTCCCATCAGGATCTCCATATAACCATACCATATTCAAATCCATGTCATCGATA
GGCTTGTTGGACATAGCAGCACATGTTTCAGACTTTACAACCGCATGTTGTTCAGAGGTATTCAGCCTATCATCCACCTGGAAGGA
CATAGTTTCACCGGCTGAGGTATCCGTAGCCGGAGACCTTTCTTGATCCAGGAAGTGAGAATCAAGAAGCTTTAACATTTCCAAGT
GATCCACTCGCTCCTTTCCGAACAACCTCATAAGCCTAGCGTCACACC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAD20117 unknown protein [Arabidopsis thaliana]8501e-088
NP_849971 PHD finger, SWIB/MDM2 and GYF domain-containing protein [Arabidopsis thaliana]8501e-088
XP_002884113 PHD finger family protein [Arabidopsis lyrata subsp. lyrata]8455e-088
XP_002267100 PREDICTED: hypothetical protein [Vitis vinifera]2326e-017
CBI17411 unnamed protein product [Vitis vinifera]2326e-017

Swiss-Prot top hits (Blast detail)Scoree value
Q9SD34 Zinc finger CCCH domain-containing protein 442305e-018
Q9SIV5 Zinc finger CCCH domain-containing protein 191982e-014
Q9FT92 Uncharacterized protein At5g084301525e-009

TrEMBL top hits (Blast detail)Scoree value
Q94JX1 Putative uncharacterized protein At2g18090; T27K22.414144e-154
Q9SL38 Putative uncharacterized protein At2g1809014144e-154
C5XK13 Putative uncharacterized protein Sb03g0343702262e-016
B8BDT6 Putative uncharacterized protein2218e-016
B9G4P9 Putative uncharacterized protein2218e-016

Arabidopsis top hits (Blast detail)Scoree value
AT2G18090.1 PHD finger family protein / SWIB complex BAF60b domain-containing protein / GYF domain-containing protein14142e-156
AT3G51120.1 DNA binding / nucleic acid binding / protein binding / zinc ion binding2304e-019
AT2G16485.1 DNA binding / nucleic acid binding / protein binding / zinc ion binding1982e-015
AT5G08430.1 SWIB complex BAF60b domain-containing protein / plus-3 domain-containing protein / GYF domain-containing protein1524e-010
AT5G23480.1 DNA binding1273e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  100%

Unigene MembersMember information