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Information for unigene UN38272

FASTA Sequence
Unigene ID: UN38272Length: 1401 SSR 
GACAGAGAATAGTGGAATTCATTCATTCATTCACAGACAACAATATCAATATCTCTAATCACAATTGACGCATGCATGCATAACTA
ACAATTACTGTAGTAGTAGAAGAAGAAGATCAGTTTCGTGTGAGAGCATCTACACGAGCCGCGACCTCGTCAAAATCTGGGACGTT
GTTGGAGGGGTTAGGCTGCCACGAAGCTGTTCGACGACACATCCTCCGTACCCCCTCACCGCTTGCTTCCTCCATTGACTCTGACC
TCATGTTCTTACTACTCACCGAATCTTCACCAGGCGCTGCCTGGGGAGGCGGGTTCGCTAATCTTCTTCTCACTGATCTCGGCTTT
GGTCTCCCCGCACTAGGAGAGTCGTCATTGTGGTCTGGCATGAGATCAGATTTGGTTATCTTCTCCGGAAGGCTTTCCTGTTTCTC
ATTTTGGGTTTGTCGTTGTTGTTGTAATTAGACGCAGGCATGAAGAATCTGTAGTAAAAAGGTTTGTTTTCTGGATCTTCCTCCTC
CTCAGGGCCAGAGACACAACTCTCGCTTGTACCCATGGAGTCGTCTTCGCTTCTTCTACTCATGGACTTGCTATCCAAAGAGTCTT
TTCTGCCATGAAACGAAAGGATGCCTCTGTTTTCAGTCGTCTTTACAGGATTATTTTGCTTTGTTTTTTGTTTTTGCGGCTCTTCA
GCAGCAGCAGGTGGTGTGTTGAGCCTCTGCTCTAAAGACTTGGCGTCCCATTTGATGGAGTATTCTATGGCAATCTCATGGAGAAG
CTCTACCTTCATTTCCTTTGACGGGGGGCGCTGCTTTGAAGCTCTCCACAAACTCAGGGTTCACAAACTGTTCAAGTGAATTAGTC
CCGTATCTGTCAGCAAACATAGACCTGAGATCGCGAAGCTCAGGCACTTCAGAGACTCTAGCGGCCGCATACACAAGGGAAGAGAT
GGCTTCCCGACACTCCTCAGGGCATTTACTGGATTTCTGTAAGAGAGAAACATTGGATGCAACACATACGCAGAATTGCTCCAACA
ACTCATAACAGGACAACCTCCTTTTCTCCTCAATAAGTCCTTCTGCCCTGCCGTATGCATTGTAATCGAGGCTGTTGTTGAGAAGA
TCGACAATGTCCTTCTTCAAATATTTGCAAACAGAGTTTTTCTTTCTCTTCACCGTCTCCACTCTTGTTTTCGTTATCTTGATCAA
GTACTTGCATTTCGTGTAGAATTTGGGTTTAAACAGAGCATCAAACATTTTGCCTTTTGAAAACTAACAGAGATATATTCGGTCCT
TCTTGTTGGTTTTTCTTTTTGTATTTTTTCTGGGTTCTCTCTCTTTCGTGCAAGAGAAAGAGAGAGAGAGATAGAGAGAGAAGAAA
TGTTGTCCTTTTGGGAAAGATGGCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_178109 Regulator of Vps4 activity in the MVB pathway protein [Arabidopsis thaliana]9153e-096
AAG52247 unknown protein; 49130-47169 [Arabidopsis thaliana]6922e-070
XP_002299697 predicted protein [Populus trichocarpa]4906e-047
XP_002516070 conserved hypothetical protein [Ricinus communis]4881e-046
XP_002304194 predicted protein [Populus trichocarpa]4395e-041

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q8L402 Putative uncharacterized protein At1g799109152e-096
Q9CA94 Putative uncharacterized protein F19K16.136922e-070
B9GFN8 Predicted protein (Fragment)4904e-047
B9RQQ1 Putative uncharacterized protein4887e-047
B9GX14 Predicted protein (Fragment)4393e-041

Arabidopsis top hits (Blast detail)Scoree value
AT1G79910.1 unknown protein9151e-098
AT1G79910.2 unknown protein4113e-040
AT1G52315.1 unknown protein3755e-036
AT4G32350.1 unknown protein3692e-035
AT1G25420.1 unknown protein2232e-018

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  100%

Unigene MembersMember information