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Information for unigene UN38337
| FASTA Sequence |
| Unigene ID: UN38337 | Length: 1291 |
SSR | | CACAAATAATTTATGGATGCATTCACTAGATATCCTATGACTGATAAACATTAATGCTAAGAAAATAGAGAAGCAAAGAGAATCCC
GATCGAAAACCTTAAACATAGTTTTTCAAGCTCACAAACACAACTTACATTAAAGTATAACATAAACTCTTACTAGACTTGATTAA
TCTTCAGGATCAAAAGGTCTGTTGTCAAAGTCTTCTCTGTCTTCAGCTATGTCAGGGCAATACCTTTGAGACAGAACCTCAACTTG
TTCTGCAAACGTTTTGCTTCCAGGCAATCCGATATGATTCACCATTTGGTTCCACCGACTTCTACAAGCATCTCCATCTCTATTAT
CCAAAAGATTATCCCAATCCACGTCGTCGACACAAGCAGCATCCAGATTCGTAAGCTCGTCCAAGAGCCTATAGTCATCCACGTTA
GCCCACATCCCATTGGCCACCATCGGTGATGTCAACTGATCATACCATTTCACGCAGCAAACGGCACGGTCCCTTGTTCCGAGCTG
GTCGCTTATAGCCATCCAAGGGATGTTATCCCTGAGCATCCCATGTTTAGAGTGCTTCTCTTTGAACGCTTTTATCCTAAGGTCTC
TGTTGACAAGATCAAAGAGGCTTTGGTACTCCTCCATAGACCAATGTCCTTTCTTCTTGGACGCCAGTCTAATCCTCCTCCAAGCG
TCTTTAACATGGTTCCTGTGTTTACCCATGGCATCCGCGAGAGTCCTCCAATCGTTGCCGCGTTTCTTCTGATGCTGCACAACGAG
CTCCAATCCTCTTTGGTCCATACCCCTTTAGATCCTTCTTCAAACAAAGTATGCGCACGATAGTAGACACCAAGGTATGGCCTCCA
GGGTAAAGCAGTAGCTATTTCTTTCCAACAGCCTTTGATTTGTTTGTGTGCCTTGCAGTTCATAACCATGTTAATCCCTTCGTCTC
CTAAAGCATGGTTCTCAACGTATTCCAATACAGATTTCTTGATCAGCTCGTCTTCTTCCTTTGTAAACCGCTTACCCCTCACCAGG
TCAACTTTTTCTTCTTCTTCTTCTTCATCATCGCTTTCTTCAGACTCCGCAGGAAAAACTTCAACTTGGTCGGAAAAGTTTACCTT
TTTAGCGGTTTTGGGTGATGGGGTGGTCACAACTTCATCACTCTTACTACCCTTCTGCTTCTTCTTCTTCTTCCTTTTCTCCTTGT
TTACTTCAGCCTCTGGATCTTCACTTTGCTTCTTCTTCTTTGCAATTTCCGGAGAGTCCAAGTCGTTTCCTTCAGCCTCTGAATTC
C
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002868619 hypothetical protein ARALYDRAFT_916116 [Arabidopsis lyrata subsp. lyrata] | 949 | 3e-100 |
| NP_198918 myb family transcription factor [Arabidopsis thaliana] | 937 | 8e-099 |
| XP_002322249 predicted protein [Populus trichocarpa] | 723 | 5e-074 |
| XP_002303776 predicted protein [Populus trichocarpa] | 704 | 8e-072 |
| XP_002282624 PREDICTED: hypothetical protein [Vitis vinifera] | 698 | 4e-071 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FLM7 Gb|AAC33480.1 | 937 | 5e-099 |
| B9IFA5 Predicted protein | 723 | 4e-074 |
| B9GZM6 Predicted protein | 704 | 6e-072 |
| B9STX4 DNA binding protein, putative | 697 | 4e-071 |
| B8B0X7 Putative uncharacterized protein | 595 | 2e-059 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G41020.1 myb family transcription factor | 938 | 2e-101 |
| AT3G57150.1 NAP57 (Arabidopsis thaliana homologue of NAP57); pseudouridine synthase | 116 | 5e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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