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Information for unigene UN38365

FASTA Sequence
Unigene ID: UN38365Length: 845 SSR 
GAACAACGACGACAATTGACTTTCAAACAACTCACCCCTTTTGCTCGCCTCATCTCTCTCCGATTCTTAAGAGCTGATTAGGGTTC
TTCGATTCCGATTGAAAGACCGGACCTTCTCTCGATTCAAGCAGATTCTCGAATCCGAAGTGTGTAATCAAATCCTCTCCGGCAAA
ATATAGCAGAGAAACAAGGGAGGAGGAAGGCGGATTCGAGCGAGATGATGCCAGTGGAGATGGTACAAATCTTCGCGACGGAGATG
ACGAATTGGTGGGACGAGGTTAACGAGTCAACTCAGTGGCAAGATGGAATCTTTTTCTCTCTCTGTGGAGCTTATGCTCTTGTCTC
TGCCATCGCCCTTTTATGGCTCAAGGATGTGGCTGAGATACACAATTTTTCCCCGAGATCGCTATGGAGTTATGGTAATCATCAGA
AACTTATCCTTTCTCCCGAGAACTATCTATTCAGGTTCTTACAGCACACTAAAGTTAGAAGCGCTTACTGCCTTGGAATATTTCCT
GATAGAGACTCAACAACACTCCTTGGAAGTAGTGTATGCAGACTCACTTTACGTATTTTGCATTCATTTCCCTCTATCTGTGAAGT
CGTGTATCATGAATTGTTGTTCGCAATACGCTCGTCACTTATGACCGTGAAAATGACAAGCTCGGGTTTTTTGAAAACCAACTGTT
CTGATCTATGGAGGAGGCTGGCGTCACCACCAGATTGCTTGTGTGTTCCTCACGTCTCTTTTTGCTTTCAACTCGATAAGTGTTAT
GTAATAAGTGACATTGCTTGTGTGTGTGTGGCTTCTTTTTTAAGTAAATATTAAATATTCTGGCAGGTCTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAB08274 unnamed protein product [Arabidopsis thaliana]2422e-018
NP_567636 tobamovirus multiplication protein 1 [Arabidopsis thaliana]2116e-015
CAB36823 putative protein [Arabidopsis thaliana]2116e-015
XP_002869863 hypothetical protein ARALYDRAFT_492696 [Arabidopsis lyrata subsp. lyrata]2062e-014
XP_002304922 predicted protein [Populus trichocarpa]1722e-010

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9FMH3 Similarity to chloroplast nucleoid DNA-binding protein2421e-018
Q9FEG2 Putative uncharacterized protein At4g217902114e-015
Q9SVR8 Putative uncharacterized protein AT4g217902114e-015
B9H1D8 Predicted protein1721e-010
Q402F4 Tobamovirus multiplication 11659e-010

Arabidopsis top hits (Blast detail)Scoree value
AT5G43100.1 aspartyl protease family protein2427e-021
AT4G21790.1 TOM1 (TOBAMOVIRUS MULTIPLICATION 1); protein binding2113e-017
AT3G50050.1 aspartyl protease family protein1404e-009
AT2G02180.1 TOM3; protein binding1136e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  100%

Unigene MembersMember information