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Information for unigene UN38434
| FASTA Sequence |
| Unigene ID: UN38434 | Length: 1275 |
SSR | | CAAATAATACCCGGTTATTTAGTGTACCGGAGTTGAAAATTTACATTCTTTTTTTTTCTCTCTCTCTCTAGTTTCTCTCCTCTCTA
ATGATCTTTAGACGAATGTTGGGCTTGTGAAAAGCTTCAAGCTTCAAGCTTTCTCTCTATCAGTGTTGGGGAGAATCGTAGTTCAC
TTCTCTTTCTCTTCTGGGGGAGTCACCTGAAGCAGCTCTATGTTTAACTCAAACGTAGCTCCAGGCTGCAACAACAAACATACACG
TTTCTCTTTTATTCTATCAAACCCCCAAACATTAAACCACATTTTGTTAAGTAAAAAACATTAAAAAGGAGCTTTCCTCATGCACA
ATTTGTAGGTTCTCACCGGTATCTCGTTCATTCCTTTCTGGCCATAACCAGCTTCAGCTGGAACAATCACAGTTCTCTTGCCACCG
ACTTTCATTCCCTCAGTTGTGTAATACATAGCAGGAGGAGGCTTTGGTGCAGCCTGTGCAGAGAACAACCCGTTTGGATTGTCCAC
AAACTCTCGTTTCCTCTCCTTCCCTGGAGTTGATCCCACCTTGAACTCATAGGGCTGAGCAATGCTACGATTCCCAGCCAAAAGCT
TGGACTCTCTGGTGGAGATTGCAGTGATGCTTCTGTAACGGCAATCAAAATGCACCTGAGCAGTTGATCCTATTGTGGCTACTGGA
CCTTTGCCTTCCTCAATGTCATAGTACTTCAACCCTTCAGCTGCAAGAAACAGAGCAAACAACAACTTCAGCATATAGCATATGAT
TACAATCTCCATAAACTGCTCTCACAAAGTAAAGCACATTCCTTCAATCAAGAATTTGAATAACTCTCGAGACCCAATTCACCAAG
AAGCCTAATTGATTTTATCTCAGAAGAATTGGTTTTGGACTCTGTTTTTTCGAGTTCACTGAATTGCTAAGAATGAGAGAGGGAGG
GGACTTAACGGCTAGTGGAATACTCGTCGAGGGGGATGACTTTCCTGCTCCGTCTCTCTCTCGCCTCCGAAGAACTCGGCGGTAGA
ACGAAGAAGCTCGTCAACGGAAGCGAGCCGAGGAGGATAAGATTCGCGTCTCTTCTGGAAATAGGAAACGAAGAAAAAGTGACGAT
TTGGTTTGTCTGACGAGATTGATCCGCTGCGTCAGAGATTCGAGGAATACGAGAGTGATGATCAGATGCACATATGTGTAAGCTAC
TAATTGCAGCCATTGATGGAGAAGCAGAGAGAGTCAGACAGAGAGAGAGAGAGAGAGAGAGAGAGAGCTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002890409 F2D10.32 [Arabidopsis lyrata subsp. lyrata] | 618 | 8e-062 |
| NP_173504 peptidylprolyl isomerase [Arabidopsis thaliana] | 614 | 2e-061 |
| AAF80622 F2D10.32 [Arabidopsis thaliana] | 602 | 6e-060 |
| XP_002306991 predicted protein [Populus trichocarpa] | 554 | 2e-054 |
| ACU16234 unknown [Glycine max] | 540 | 9e-053 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LM71 Probable FKBP-type peptidyl-prolyl cis-trans isomerase 1, chloroplastic | 614 | 1e-062 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q541Y2 Putative uncharacterized protein At1g20805/F2D10_27 | 614 | 2e-061 |
| B9H5U8 Predicted protein | 554 | 1e-054 |
| C6T3J6 Putative uncharacterized protein | 540 | 6e-053 |
| B9R8R8 FK506 binding protein, putative | 534 | 3e-052 |
| A5BH88 Putative uncharacterized protein | 531 | 6e-052 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G20810.1 immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein | 614 | 8e-064 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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