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Information for unigene UN38449
| FASTA Sequence |
| Unigene ID: UN38449 | Length: 1047 |
SSR | | GAAACAAAACAAAAAAAAACAAATCTCTCCTACACTCTCGCCGGAGATGCAACTCTTCCTCCTCCTCCTCCTCGCCGCACTATCAC
CTCCGGCGACTTCCCACTACTCCTCCTCAACCTCATCTCCTTCCTCTTCCACCGTCTCTACCTCCGCCTCCGAATGGCGTCCCGCG
CGAGCCACCTACTACGCCGCGACCAACCCTCGAGACGCGGTAGGCGGTGCGTGCGGATACGGAGATCTCGTCAAATCCGGGTACGG
CATGGCCACGGTCGGTCTGAGCGAGACGCTGTTCGAGCGGGGACAGATCTGCGGCGCTTGCTTCGAGCTCAGATGCGTCGATGATC
TGCGCTGGTGTATCCCCGGGACTTCCATCATCCTCACCGCCACGAACTTCTGCGCTCCTAATTACGGTTTTGACCCCGACGGTGGC
GGTCACTGTAACCCTCCCAACAAACACTTCGTGTTGCCCATTGAGGCGTTCGAGAAGATCGCTATTTGGAAAGCTGGGAACATGCC
GGTGCAGTATCGAAGGATCAACTGTAGAAGGGAAGGAAGCATTAGGTTTACAATAGATGGTGGAGGCATTTTCATTTCGGTTCTGA
TCACCAATGTTGCTGGGTCCGGTGATATAGCTGCTGTGAAGGTTAAAGGGCCTAGAACCGGGTGGTTACCAATGGGTCGTAATTGG
GGACAGAACTGGCATATCAACGCTGATCTCAAGAACCAAGCTCTCTCGTTTGAAGTGACTGCTAGTGACAGATCAACCGTGACAGC
TTACAATGTTGCTCCTAGAAACTGGGATTACGGACAAACCTTTGAAGGGAAACAGTTCGAGACTCCGTGACACACAGAGAAGGGTA
CACATCGAGATATAAGAATTTTTGATGGCACGTGACTAAGGAGTGTTCTTTTGCATTTTATAGTTTCGCTCTCCCACGAATAGGTA
CAAGGAGAAGTCACCCATGTTGTACTAAGAATAGTGATCACACAAACATCACTATTGTATCTTTACATTGCTAAGGAGCAAAAGCT
TCTTCTCAAATGTTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_566197 expansin A13 [Arabidopsis thaliana] | 1345 | 3e-146 |
| XP_002884363 ATEXPA13 [Arabidopsis lyrata subsp. lyrata] | 1344 | 4e-146 |
| AAM67333 Alpha-expansin 13 precursor (At-EXP13) (AtEx13) (Ath-ExpAlpha-1.22) [Arabidopsis thaliana] | 1343 | 5e-146 |
| XP_002270003 PREDICTED: hypothetical protein [Vitis vinifera] | 1165 | 2e-125 |
| XP_002526588 Alpha-expansin 13 precursor, putative [Ricinus communis] | 1096 | 2e-117 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8LAT2 Alpha-expansin 13 (At-EXP13) (AtEx13) (Ath-ExpAlpha-1.22) | 1343 | 3e-146 |
| B9SKR9 Alpha-expansin 13, putative | 1096 | 1e-117 |
| Q9ZP33 Expansin | 1088 | 1e-116 |
| B9MWX2 Putative uncharacterized protein PtrEXPA23 (Fragment) | 1085 | 3e-116 |
| B9H3G6 Putative uncharacterized protein PtrEXPA8 (Fragment) | 1061 | 2e-113 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G03220.1 ATEXPA13 (ARABIDOPSIS THALIANA EXPANSIN A13) | 1346 | 9e-149 |
| AT3G55500.1 ATEXPA16 (ARABIDOPSIS THALIANA EXPANSIN A16) | 706 | 1e-074 |
| AT2G37640.1 EXP3 | 701 | 5e-074 |
| AT2G39700.1 ATEXPA4 (ARABIDOPSIS THALIANA EXPANSIN A4) | 693 | 4e-073 |
| AT5G56320.1 ATEXPA14 (ARABIDOPSIS THALIANA EXPANSIN A14) | 691 | 8e-073 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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