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Information for unigene UN38528
| FASTA Sequence |
| Unigene ID: UN38528 | Length: 940 |
SSR | | GGACAGACGGAGCCAGCGAGAGAAAGTGACTCCACCTTCTTTGTCTCTTTCGATTCCCTCTCCCTCTCTCTCTCTCTCTCTCTCTC
TCTCTTCTTTATAGAATACAGCAAGAGGCGCGCGTGTGCATTTTGAGAGCGAATCGAGCGAGAAGATGGGCAAGTCAAAGTGTTTC
ATGGACATTAGCATTGGAGGCGAGCTTGAAGGGCGAATCATCATCGAGCTTTACGACGACGTCGTCCCCAAAACCGCCCAGAATTT
CCGATCGCTTTGCACCGGCGACAAAGGCATCGGCCCCAACACCGCCGTCCCTCTCCACTACAAGGGGAATCGGTTCCATCGTGTAA
TAAAGGGGTTTATGATTCAAGGAGGGGACATATCAGCTAACGATGGTACTGGTGGTGAATCTATCTACGGGTTAAAGTTCGAAGAT
GAGAACTTTGAGCTCAAACATGAGAGGAAAGGGATGCTCTCTATGGCTAACTCTGGCCCCAACACTAACGGCTCTCAGTTTTTCAT
CACCACCACTCGCACTTCTCATCTTGATGGCAAGCATGTCGTCTTTGGAAGGGTTACCAAAGGAATGGGAGTGGTTCGTTCCATTG
AGCATGTTTCGACCGAGGAAAACGCTTCTCCTTCTCTCGATGTTGTGATTCATGACTGTGGGGTCATTCCTGAGGGTGAAGATGAT
GGGATTTGTAACTTTTTCAAGGACGGTGATGTCTTCCCTGACTGGTCTATTGATCTTAATGAAAGCCCTCCTGAGCTGTCTTGGTG
GATGGAGACTGTTGATTCTGTCAAGGCTAGTGGTAACGACCACTTTAAGAAACAAGACTACAGATGGCTCTTAGAAGTACCGCAAG
GCTTTGCGTTATCTGGATATTTGCTGGGAGAAAGATGGCATCGACCAGAGACGAGCACTGCCTTGCGTAGACTAAGTCGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_565381 Peptidyl-prolyl cis-trans isomerase CYP40 [Arabidopsis thaliana] | 1139 | 2e-122 |
| XP_002330280 predicted protein [Populus trichocarpa] | 1034 | 3e-110 |
| XP_002313093 predicted protein [Populus trichocarpa] | 1031 | 6e-110 |
| ACU22890 unknown [Glycine max] | 1023 | 5e-109 |
| XP_002521846 peptidyl-prolyl cis-trans isomerase d, ppid, putative [Ricinus communis] | 1020 | 1e-108 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9C566 Peptidyl-prolyl cis-trans isomerase CYP40 | 1139 | 8e-124 |
| P26882 Peptidyl-prolyl cis-trans isomerase D | 643 | 3e-066 |
| Q6DGG0 Peptidyl-prolyl cis-trans isomerase D | 641 | 5e-066 |
| Q9CR16 Peptidyl-prolyl cis-trans isomerase D | 639 | 8e-066 |
| Q08752 Peptidyl-prolyl cis-trans isomerase D | 636 | 2e-065 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q08A80 At2g15790 | 1139 | 1e-122 |
| B9N4V5 Predicted protein | 1034 | 2e-110 |
| B9HRW8 Predicted protein | 1031 | 4e-110 |
| C6TJ00 Putative uncharacterized protein | 1023 | 4e-109 |
| B9S777 Peptidyl-prolyl cis-trans isomerase d, ppid, putative | 1020 | 8e-109 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G15790.1 SQN (SQUINT); peptidyl-prolyl cis-trans isomerase | 1139 | 7e-125 |
| AT3G63400.1 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein | 556 | 3e-057 |
| AT3G63400.2 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein | 556 | 3e-057 |
| AT4G38740.1 ROC1 (ROTAMASE CYP 1); peptidyl-prolyl cis-trans isomerase | 537 | 5e-055 |
| AT2G21130.1 peptidyl-prolyl cis-trans isomerase / cyclophilin (CYP2) / rotamase | 535 | 8e-055 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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