Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN38581

FASTA Sequence
Unigene ID: UN38581Length: 1232 SSR 
AATTGAAATATTTATTTCATCGCTCCAAAGAAATGGTCCCGGGGGACTCTAAAACATTTTGAGCTGCCACTAGATTCTATCTTAAT
AAAAAAAAATTCATCAATCGTAAATAGAAAAATTCGTCACTATCTTGAAATAAAAAGGACTCTATTACACATGGCTTAGCCTTAGA
CAAATCTGCGGACCGGCCTTTAATCCTTATACAGCAGATGCAAACTATGGGCGCTTAAGTTTTAGTGTTGAGCTTTGTGTCCAAAA
GCTTTGATGATATGAACAAGCAACTTGTCTCCTGTATGTGTCTGACTCGTTGTATTAGTTCACTCCGCGAGATTCTCCTGTTTTGC
TGATCTTTATAGTGTTTCTGAATGATGAGTATTTGGGAAGGAGGTAGGAACTTGGATAATGCTTTGATCAATACAGGAAACGCCAT
CCATGGTGATCTCAATCTCTTTGGACTTCTGTTGAAGTTAAATGGAGCTTTGATGCAGACAAGAAACTCAGGCAAGACATGTGTGT
TCATGTGTGTGCTCCACACAATATACTTGCTCGGAGAAGCTAAATCATCCACACCAGAATCAAGCTCTGGAGAGCTCGGACACGAC
TGAGTCGAGCCTCGTGGAACTATCTCTGATTTTCCAAGTAAAACTCTAGAAAGCAGCATGAATCTCATCCCATCTTCTGATTCTTC
AGCTGAGTCCTTCAAACATTCAAGAAGAGCATTATCCGGGGAGAGATACAATCCACGGCCATAAGATCCATCGTTTCTTGGCTGGC
TAAAACCATATTCAAGAACCGACTTCAACTCTGTTTTCTTGACGGCGCACCAGCCGTATTTGACTCTAGCTTTATTACTTCCTCCT
CCTCCTCCGCCGTGTTTCATCTCCACCGCCTCTTGAAAAACCTGGAAACTCTTTAGCTTAGCACGAGACCCAACGGTGGGAAACCC
GTTTCTCAGAATCGAGAGAAGCTCGCATTGGTCTCCGAGAGCAGATTTACAGTTACGGTAGATAAGATCGTAAGCTCTATCGCCTT
CAAGCAGCTCCATGAGCCCGTGCTCGTCGGCGAAAGAAGGTCGTTGCTGATCATACGAGTCGCAGCTTCCAGATTCAGATATCGTT
GATCTTTCTTCTTGCTCTGAGTCGAGGTTAGCTTGAAACTCTGTTCTCAAGTAATCCATTGGTAAGAAAAAGTCTTTATAGCTTTG
AATGATTTGTTCGTGTTTTGAGTTATCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_201058 RCD one 5-like protein [Arabidopsis thaliana]12111e-130
AAM64396 unknown [Arabidopsis thaliana]11922e-128
NP_974981 RCD one 5-like protein [Arabidopsis thaliana]9441e-099
XP_002875860 hypothetical protein ARALYDRAFT_323380 [Arabidopsis lyrata subsp. lyrata]7244e-074
XP_002318648 predicted protein [Populus trichocarpa]6098e-061

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9FJJ3 AT5g62520/K19B1_1312119e-131
Q8LCY5 Putative uncharacterized protein11921e-128
Q3E871 Putative uncharacterized protein At5g62520.29448e-100
B9I3A2 Predicted protein (Fragment)6096e-061
B9RB22 Putative uncharacterized protein6061e-060

Arabidopsis top hits (Blast detail)Scoree value
AT5G62520.1 SRO5 (SIMILAR TO RCD ONE 5); NAD+ ADP-ribosyltransferase12223e-134
AT5G62520.2 SRO5 (SIMILAR TO RCD ONE 5); NAD+ ADP-ribosyltransferase9552e-103
AT3G47720.1 SRO4 (SIMILAR TO RCD ONE 4); NAD+ ADP-ribosyltransferase7133e-075
AT1G23550.1 SRO2 (SIMILAR TO RCD ONE 2); NAD+ ADP-ribosyltransferase4283e-042
AT1G70440.1 SRO3 (SIMILAR TO RCD ONE 3); NAD+ ADP-ribosyltransferase3503e-033

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
124  67%
 
212  33%

Unigene MembersMember information