Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN38583

FASTA Sequence
Unigene ID: UN38583Length: 1243 SSR 
GGGAGAAGAAAGTGTTCTCCTTTATGATATATCACACGATAAAGTGAATCACCGAAGCGAAGGCGATCTTGCGGATTCACAGAAGC
TAAAAGCGAGTCACGGCGACGGGTGACGTTGTAAAGGGTCCGTCGAGAATGGCCCCTAAGGTGTTGTTTTACTCAATACTGCTTAC
GCTTCAGTACGGAGCTCAGCCTCTGATCTCCAAACGCTACATCGGGAAGGAGGTTATTGTAACTTCATCTGTCTTGACGTGCGAGA
TTGTAAAGGTCATATGTGCTCTGATCCTCATGGCAAGAGATGGTAGTTTGAAGGGATTAGCAAAAGAATGGACCTTGATGGGATCC
CTGACTGCCTCAGGCCTCCCTGCAGCCATATACGCACTACAGAACAGCTTGCTGCAGATCTCTTACAGGAGCCTCGATTCCTTGAC
GTTTTCGATTCTGAATCAGACCAAGATCTTCTTCACAGCCTTCTTCACGTTCATCATACTAAGGCAGAAGCAATCGGTTCAGCAAA
CAGGAGCTTTGTGTTTACTGATCATGGCAGCGGTTCTTCTAAGCGTCGGCGAAGGCTCTAACAAGAGTTCGAGCGGCGTTAACCCG
GAGCAAGTGCTGTTCTATGGGATCATACCGGTCTTGGTAGCCTCTGTGCTCTCCGGTTTAGCCTCTTCTCTGTGTCAGTGGGCTTC
TCAGGTGAAGAAGCATTCATCGTACTTGATGACGGTGGAAATGTCTATTGTTGGAAGCCTCTGCTTGTTGGTAAGTACTCTTAAGT
CTCCTGATGGTGAAGCGATTAAAAGAAATGGTTTCTTTCGTGGTTGGACTGCTTTAACCATGGTTCCAGTTGTAAGCAATGCTCTT
GGTGGGATTCTCGTTGGCGTAGTTACGTCACATGCCGGTGGTGTAAGAAAGGGATTTGTGATTGTGTTGGCGTTACTTGTGACGGC
TCTGCTGCAGTTTGCGTTTGAAGGAAAACCGCCTTCATCGTATTGTCTTGTGGCTCTTCCTCTTGTGATCAGTAGTATCTCGTTGT
ACCAGAAGTATCCATACTTGGACAAGAAGAAGAAGAAGAAGGTCTAAGAAACCTCTTAGCATCTTCTCAAGTTCTGCTAAATATCT
AGATGATAGTGATTCTTGGACCATTCAAATGAAAATTTGTAATATTACAATGATAGTTGATACATTGAATGAGTCCTGTAATGATC
TGAACCCAAGCTGAGTTTTAATTACCAAAACCTTCATAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_569004 Nucleotide-sugar transporter family protein [Arabidopsis thaliana]14557e-159
XP_002866646 nucleotide-sugar transporter family protein [Arabidopsis lyrata subsp. lyrata]14549e-159
AAL57713 AT5g65000/MXK3_23 [Arabidopsis thaliana]14493e-158
XP_002307086 predicted protein [Populus trichocarpa]13079e-142
XP_002310563 predicted protein [Populus trichocarpa]12863e-139

Swiss-Prot top hits (Blast detail)Scoree value
Q93890 UDP-galactose/UDP-N-acetylglucosamine transporter srf-32501e-020
P87041 UDP-galactose transporter2223e-017
Q6AXR5 UDP-N-acetylglucosamine transporter1847e-013
Q6YC49 UDP-N-acetylglucosamine transporter1839e-013
Q9Y2D2 UDP-N-acetylglucosamine transporter1821e-012

TrEMBL top hits (Blast detail)Scoree value
Q8LES0 At5g6500014554e-159
Q8VYH1 AT5g65000/MXK3_2314492e-158
B9H4U1 Predicted protein13076e-142
B9HFG5 Predicted protein12862e-139
B9SZ37 UDP-N-acetylglucosamine transporter, putative12727e-138

Arabidopsis top hits (Blast detail)Scoree value
AT5G65000.1 nucleotide-sugar transporter family protein14552e-161
AT5G65000.2 nucleotide-sugar transporter family protein10905e-119
AT4G18197.1 PUP7 (PURINE PERMEASE 7); purine transmembrane transporter1173e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  50%
 
71  50%

Unigene MembersMember information