Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN38610

FASTA Sequence
Unigene ID: UN38610Length: 1026 SSR 
TTTTTTTAAACTTGAGAGAGAGAGAGTTCGACTTGTTTATCATCCTACAGAGCTTAATGAAGCATCATAGTTCCATTCATAGAAGC
AAAGCATAATACTCTCATGAAAACTTTTTAAAATAAAAATGCGAAATGACAAGTGACAAAGAGTGAGAGAGGGTCCAAATGCTAGT
TGTGTCCTCCTCCTGGTTCACCATCAGCATCATCATCATCGTGAAAGTGTTTGAGGGCATTGAGAATCCGAGCTTCCATTTTCCTG
ACACGGGCAAGCAACCGATTGCAAGAGGTAAGGTAACCCTTAACCTTGTCCTTCTGGCATTGATCCACATAAACCTCCATATCCCT
GAGGAGATCCATCAGCTCGTCAACCACCTGAAAATACTCCATGACCCGACCCGGGTCTCTCTCCACCACCTCCTCCAACTCTCTCC
TCGCCCTTTCTAGCCACTCGGCGGACAAGCGAATCCGTGCTTTCAGGGATTCGTAGTTACCATCATCGGAGGAGGAGTAGAGTTTG
AAGACAGTACCTGGCTTGGTTTTGTAAAAGTGGAGAGCTTTGACATGACCCCGCGGCTTGTGCTTCAAAGGTAGCTCTTTGACCGC
ACCTTCTTCCTCCAGTTCTAGATCAACAGGAGCGGTGATGATTGGAGGGTATCGGTGGAGGCGAAGGAAGAACCAGGCGGAAGCTG
CGACTGCGACGGCGGGGACGATCAAGTGGCCGCCGAATTGGATTTTGAAACCATTACTATTGCTAGGAGGAGGAGTAGGAGAAGAA
GGGTCTGAGGGTGAAATGGACGGAGAAGTGATGGCGAAGAGAGAAATAGGGTTGGAAGGTCTGTAATAATGGTGAAAGGAGGAGGG
CATCTTGTACTGACAATACGCCTTCACCACGCTTCCCATCTTTCCCCCAACTTGTAAAATGTTTTTTCGACTAATTCAATTTACTA
CCAACAACCCTAAACCCCCAATTTTCATCCTTTTGCTGCACCCCGCCACCACAATCAATCTTCTTCTTCTCTCCAGGCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_563642 uncharacterized protein [Arabidopsis thaliana]8112e-084
XP_002889342 hypothetical protein ARALYDRAFT_470075 [Arabidopsis lyrata subsp. lyrata]8094e-084

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9LPC2 At1g019908112e-084

Arabidopsis top hits (Blast detail)Scoree value
AT1G01990.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: chloroplast lumen common family protein (TAIR:AT2G37400.1); Has 16 Blast hits to 16 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).8119e-087

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  100%

Unigene MembersMember information