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Information for unigene UN38631
| FASTA Sequence |
| Unigene ID: UN38631 | Length: 810 |
SSR | | GCTACCACTGATCTTTTTTCTCTTCATTACAAACTCCAAAACTTTTTTTTCATTTCCGGATCACACTATCACAGCACAGAGATAAC
CAGAATTTGAAAGAACACAAAGCCAAACAATCTCCGACCAAAAAAAAAGAAGAAAGAGATGAAAGATTACAACATCCGTTTTCTTA
GTTATCCATCAATCACTGCTCTCAAAACAACCTAAGCGTACACTGATCCATAAGAGAGAGCCATGAGAAGCACCGCCGCTTACTCT
TCCTCCCCGAGCTTCCGCAGCTGCTTCTCCACCGTCGATGATGATCGCTTCGTCATCCCCAAATCCATCATCCTCTGTTTCATCGA
TTCACCAAATTTAGGGTTTCTCTTCAGATCGCCGCCGCCGCCGGAGTTAGATTTCTTCGGCTGCTTCTTGTCTTCCCCTCCTCCTC
GTCTTTTCTTCCTGTTTCTGATCCCACACGCGTTACAAAGCGACTTTGGACCGGCGGGACCGCCACGCCAGAGAGGAGTTTTGCTT
GCACCACAATCGGCGCAAGTCTTCTTGTCGTTACTACAAGCCTCGTTCTGTTCGATCACATCCTCTCCACCTCTTCTTCTCTTCGA
ATCCTTCGCGCAGTGATCTAGCATTTCTCCACTTCCTATGATCAGAACCGCTAGGGTTTGAGATTGATCGCGTCTCTTCGGGAAAC
AGAAAGATCAGTTTTTTTTTTTGAAAAAAGCAGGAGGAGAGTGAAGAAGAGTGTAGAGAGAGAGAGAGAGTGAGAGAGAGAGAGAG
AATAGAACTGAACCGACATACACCTACGCAAGGTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_199741 GATA transcription factor 16 [Arabidopsis thaliana] | 442 | 9e-042 |
| XP_002865725 hypothetical protein ARALYDRAFT_917909 [Arabidopsis lyrata subsp. lyrata] | 409 | 6e-038 |
| NP_566290 GATA transcription factor 15 [Arabidopsis thaliana] | 361 | 2e-032 |
| AAF63824 hypothetical protein [Arabidopsis thaliana] | 361 | 2e-032 |
| AAM61093 unknown [Arabidopsis thaliana] | 358 | 5e-032 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FJ10 GATA transcription factor 16 | 474 | 8e-047 |
| Q8LG10 GATA transcription factor 15 | 361 | 1e-033 |
| Q9LIB5 GATA transcription factor 17 | 207 | 8e-016 |
| Q5HZ36 GATA transcription factor 21 | 166 | 4e-011 |
| Q8LC59 GATA transcription factor 23 | 166 | 4e-011 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C0SVS9 Putative uncharacterized protein At5g49300 (Fragment) | 442 | 7e-042 |
| B9MZZ3 Predicted protein | 346 | 9e-031 |
| B9RZK8 GATA transcription factor, putative | 341 | 3e-030 |
| B9HX95 Predicted protein | 330 | 6e-029 |
| A5BCR3 Putative uncharacterized protein | 286 | 8e-024 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G49300.1 zinc finger (GATA type) family protein | 475 | 6e-048 |
| AT3G06740.1 zinc finger (GATA type) family protein | 364 | 4e-035 |
| AT4G16141.1 sequence-specific DNA binding / transcription factor/ zinc ion binding | 213 | 1e-017 |
| AT3G16870.1 zinc finger (GATA type) family protein | 207 | 7e-017 |
| AT5G56860.1 GNC (GATA, nitrate-inducible, carbon metabolism-involved); transcription factor | 166 | 4e-012 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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