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Information for unigene UN38641
| FASTA Sequence |
| Unigene ID: UN38641 | Length: 1437 |
SSR | | GGGATACATAAAAACCCTAATTTTGATACATAAGCTTTAAGAACCTTCTCGAGAGATCCTTTGGTGTACACTTTACTGTTTTTTTG
GATTTGATTTGATTTGATTTGAAGAAGAAGAAATGCCTCCAAAGCAACAACCAAAGGCAGATTTGGCGAAAAGCAGAAGCAAGTGG
AAGACAAGACATTCGGTCTGAAAAACAAGAACAAGAGCAAGAATGTTCAGAAGTATGTCCAGAGTCTCAAGCAATCTGTTCAACCA
AAACCCGACGCTTCTAAAGTTGCAGCCAAGAAAAAGAAAGAGGAAGAGAAAGCGAGAGAACAGGAGTTGAATGAGTTGTTCAAGGT
TGCCATTAGTCAGCCCAAAGTTCCTGTTGGTGTGGATCCAAAGTCCATCTTGTGTGAGTTTTTCAAGGCGGGGCAGTGTCAAAAGG
GTTTCAAGTGCAAGTTCTCTCATGATTTGAACATTCAAAGGAAGGGTGAGAAGATCGATATCTACAGCGACAAGCGTGATGAAGAT
GGAGATATGGAGGAGTGGGATCAAGAGACCCTTGAGAAGGTTGTGGAATCGAAGAAAAATGAATACAACCAGAACAAGCCAACCGA
TATTGTTTGCAAGTATTTTCTGGACGCGGTGGAAAAGAAACAGTATGGGGTGGTTCTGGGCTTGCCCCAATGGTGGTAAAGAGTGT
CATTACAGACACGCTCTTCCTCCTGGCTATATCCTTAAATCTCAGATGAAGGCGCTCTTGGAAGAGGAGTCACAAAAGATGCCAGT
TGGAGAAGAAATCGAAAATGAGCGTGCAAAACTGAAAACGGCAACACAAATGACACCTGCGCTATTTATGGAATGGAAGAGGAAGA
AAATAGCTGAGAGAGATGCAGGTTTGGCTGCTTTTCAGGCGGAGAGAGCTAAGAACGACCGTATGAGCGGTCGGGAGCTGTTTCTG
TCGAATGCAAGCTTGTTTGTGGATGATGCTGAGGCTTTTGAAGAATACCAGAGGGACAAAGAAGAGGAAGAGATTGACCAAAAGGA
AAAGAACAAAGAAACAGAGGCAGGGACAAGCAAGAGTAGTGTTGTTGATGGTGAACAGAAAGAAGATGAAGATAATGATGATGAAG
ATGATGATGATGATGATTTGGACATGGATGAGCTTGATGAATTGGAAGCAAGCTTGTCGAAAGCGTCGATCCAGATTAGTGAGCCA
AAGAATGAAGGATCATCATCTTGAGATGTGTGAGAGGAAAGCATATGTTTTGGTTTGTGTACTTTCGATAATATTGGATTATGAAT
TGGTTTACTTCATCAGTTTACGAGGCTAGACGAGAAAAAAATGTCTTGGTAAACATAGTTGCTGGGGTTGCCTGTTTTATGGATTT
TTTTTTTAACTTGGGACTAGAAACTTGACAAGTCAAAAGCCATGAGAATGTGGTGTTTGCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_179618 zinc finger CCCH domain-containing protein 21 [Arabidopsis thaliana] | 853 | 5e-089 |
| XP_002883934 zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp. lyrata] | 853 | 5e-089 |
| XP_002525195 zinc finger protein, putative [Ricinus communis] | 789 | 1e-081 |
| XP_002456593 hypothetical protein SORBIDRAFT_03g039020 [Sorghum bicolor] | 786 | 3e-081 |
| NP_001149321 LOC100282944 [Zea mays] | 783 | 7e-081 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SK74 Zinc finger CCCH domain-containing protein 21 | 859 | 4e-091 |
| Q0JHZ2 Zinc finger CCCH domain-containing protein 11 | 759 | 2e-079 |
| Q54DA5 Zinc finger CCCH domain-containing protein 15 homolog | 451 | 9e-044 |
| Q5H7N8 Zinc finger CCCH domain-containing protein 15 | 428 | 4e-041 |
| Q803J8 Zinc finger CCCH domain-containing protein 15 | 423 | 2e-040 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9SGS6 Zinc finger protein, putative | 789 | 9e-082 |
| C5XP17 Putative uncharacterized protein Sb03g039020 | 786 | 2e-081 |
| B6TD33 Nucleic acid binding protein | 783 | 5e-081 |
| B9HM02 Predicted protein | 779 | 1e-080 |
| B9MT73 Predicted protein | 768 | 3e-079 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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