 |
Information for unigene UN38662
| FASTA Sequence |
| Unigene ID: UN38662 | Length: 1078 |
SSR | | ATTCATTGCATTATATATATATATATAGATACATTATGGAGTGATCTATATATACAAAGATCTAAAAACAGTCAGCTCTATTAACT
TCCATCTGCTTCATGTTAAAAGAAAAAACAATGTTAAAAGTCATCTCATGTTGCAGCACTGTGGCTTCCCGAGTCTCTGCAGCTTA
TCCCACATGCAAATCATCTGCCTTGGCGACTGGTAATGAGCAGTGAAGTAGTCTTCTATGCATCCGAACTGGCAGAACCTGAGGCT
GTGAACAACAGCCACCGGTCTAGTCTTGTTGAACTTCTCCACCCACATTCCCATGCTCACATCTTCCATCTTGAATAATCTTAATC
TCTGCTGCTCAAAATCGTCGACGATGAACTTAGCTATATCATATGACAAGATGTAACCCGGACCATTAGCATACGGAGGATAATAC
TCTTCTGGCCATTCCTCGTATGTCACAGCCCATTCCCGTTGCGTAGAGGCTTGTGGTAGAAGTTAATGTTCCCAATATAAAGGCTA
CCTCCTCCCTTAACCTTCTCTGCTTGTTGGATAACAGCATCCACTCGCACAAACGTATCGTCGTCACATTTCATTATATACTTTGC
CGCCACTGTGCTAACCCCATATTCGCAGATGGCAACCGTCTTGAGCACAACAAGGTCATAATGATCCATGTACGGTACTATGACGA
TATCACCAAAGTACTCTGCTTCTTTCTTTAGATCCACATTGACTTCTTTTCTTGCGTGCAATGCCACAAAGAACCGGGCGACAACT
TTGGATGATCTGATTAGCTTTTGCTGCATCCACGACTTCCTCACAGCCATTCTCTCTGCAAAATGGTTACCAGAGGAGAGAATCCC
TATGAAGAGCTCAACAGGCTTCTCAGGTAACGCAGGAGCTTTCCACATGCTTTGCATCTCGAGATGCTTTTGCGGCGCGAAACTAG
GGTTTGTGGAGGGTAAAGATGAAGCATATATCGAATGCACATCAATGTTCCCCTTCACTGCTAATCCAGTAGCATCCTCTAGAACA
AACCCGGTTCTGTAAGGGAAAGATGTGATATGTCTTCCGTTAACGC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002893356 galactosyltransferase family protein [Arabidopsis lyrata subsp. lyrata] | 1002 | 2e-106 |
| NP_174032 putative beta-1,3-galactosyltransferase 17 [Arabidopsis thaliana] | 997 | 7e-106 |
| BAC42872 unknown protein [Arabidopsis thaliana] | 993 | 2e-105 |
| CAN79615 hypothetical protein VITISV_004976 [Vitis vinifera] | 877 | 6e-092 |
| CBI15300 unnamed protein product [Vitis vinifera] | 876 | 7e-092 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8GXG6 Probable beta-1,3-galactosyltransferase 17 | 997 | 3e-107 |
| Q9LV16 Probable beta-1,3-galactosyltransferase 19 | 844 | 2e-089 |
| Q8RX55 Probable beta-1,3-galactosyltransferase 18 | 826 | 2e-087 |
| A7XDQ9 Probable beta-1,3-galactosyltransferase 20 | 731 | 2e-076 |
| Q9ASW1 Probable beta-1,3-galactosyltransferase 16 | 401 | 4e-038 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A5C2W5 Putative uncharacterized protein | 877 | 4e-092 |
| B9HU75 Predicted protein | 873 | 1e-091 |
| A5AJ66 Putative uncharacterized protein | 860 | 4e-090 |
| B9R916 Galactosyltransferase, putative | 858 | 6e-090 |
| B3H4Y4 Uncharacterized protein At5g62620.2 | 857 | 8e-090 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G27120.1 galactosyltransferase family protein | 997 | 3e-108 |
| AT5G62620.2 galactosyltransferase family protein | 857 | 4e-092 |
| AT5G62620.1 galactosyltransferase family protein | 844 | 1e-090 |
| AT1G74800.1 galactosyltransferase family protein | 826 | 2e-088 |
| AT4G21060.1 galactosyltransferase family protein | 731 | 2e-077 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
