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Information for unigene UN38716
| FASTA Sequence |
| Unigene ID: UN38716 | Length: 722 |
SSR | | GGTAGAAGTTAGACTTTTCTTTTTTATCACATTTTAGAAAAGGTACCTAAAAAGCATAGTAGTAAATTATTATTCCCAGTTTTTTT
AGAGAGGATCCAAATCTAGAAAACCCTAGGCCAAACCACCGTTCGCCGCCGCGGATCCGTTGTTGCTGCTGTTGTTAGCGAGGGAG
GACGACGTCATCATCTTCCGAAACTCCTCGAAGTTGACATTCCCGTCGCCGTCAGCATCCACGGGGCCGATCATCCGAGCGCAGTC
CTCCACGGAGCACGACATCCCCAAACGGTTAAGCACCTTGTGGAGCTCGGCCGCGGAGATGAGCCCGTTCTTGTCCTCGTCGTACA
GATCGAAGGCGTCGCGGATCTCGGAAGCGGAGGAAGATGAGCGGCAGAGGGCGGAGAACTCGTCCACGTTGATGAAGCCGTCGCGA
TCGGTGTCGACCTCCTCCAGGACGCGGTTGAGCTCCGTCTCCGTGTAGGAGGTCCCCATGGCCTTGAAAACGCCTCCGAGCTCGGT
CACCGAGATCTTACGTCGCCGTTGGAGTCGAACTGGTCGAAAACCTTCTTGAGCTCCTCGGGATTCGCCATGTCAACCACCGTTGG
TGCTGGTGGCGTAGGTTTGGCGGTTTCGGGGTGAGCGCTTGCCATTTTTACTTTTCTGTTAGAGGTAAAAGTTAGAGAGAGAGAGA
GAGAAAATTAGTTGGAGGCTCTGCTAGTGGATCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002892987 hypothetical protein ARALYDRAFT_889234 [Arabidopsis lyrata subsp. lyrata] | 595 | 1e-059 |
| NP_173259 putative calcium-binding protein CML27 [Arabidopsis thaliana] | 592 | 3e-059 |
| XP_002887495 hypothetical protein ARALYDRAFT_476499 [Arabidopsis lyrata subsp. lyrata] | 518 | 1e-050 |
| NP_177504 putative calcium-binding protein CML26 [Arabidopsis thaliana] | 497 | 3e-048 |
| AAM67075 putative calmodulin [Arabidopsis thaliana] | 497 | 3e-048 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LE22 Probable calcium-binding protein CML27 | 592 | 1e-060 |
| Q9C9U8 Probable calcium-binding protein CML26 | 497 | 1e-049 |
| Q9M7R0 Calcium-binding allergen Ole e 8 | 356 | 3e-033 |
| Q9C8Y1 Probable calcium-binding protein CML23 | 298 | 2e-026 |
| Q9FYK2 Probable calcium-binding protein CML25 | 292 | 9e-026 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9IEB3 Predicted protein | 408 | 5e-038 |
| Q93YA8 Calcium binding protein | 399 | 5e-037 |
| B9I2F7 Predicted protein (Fragment) | 381 | 6e-035 |
| A5ATQ5 Putative uncharacterized protein | 376 | 2e-034 |
| C6T2C2 Putative uncharacterized protein | 367 | 3e-033 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G18210.1 calcium-binding protein, putative | 592 | 1e-061 |
| AT1G18210.2 calcium-binding protein, putative | 592 | 1e-061 |
| AT1G73630.1 calcium-binding protein, putative | 497 | 1e-050 |
| AT1G66400.1 calmodulin-related protein, putative | 298 | 2e-027 |
| AT1G24620.1 polcalcin, putative / calcium-binding pollen allergen, putative | 292 | 8e-027 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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