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Information for unigene UN38722

FASTA Sequence
Unigene ID: UN38722Length: 1411 SSR 
GCTCAAACACTTTATCTTTAGAACCCAAAAAACCGAATTGTCATAGAGAAAACAGAGGAACCTTATCAGTTTTTTTTTCTACAACT
ACAGGCTTCATAGAATGGTTCTATACTCACTATATCTATATGAATCACATATACAGGCTCTTGAGTAATGTATATATGAACCTGGA
ATCGGAATATGTTAGAGAAAGAATGGTAACAGTTTCTCAACTCGAAAGGCTTTTCTTGTTCCAAGAATTGTCTCCATAAGGCCTCG
GATTTTTTAAATGGAGTAACATGAAGATGATGGATATGACTATGGAAGAGGCACCAACGACGATATATGTGATACCGAGAAAATCA
TTTCTTCCTCCTAACCAACTTGACGTGGAGAGAATAAGCTTCTTCTGCCCACTAAAGCTATAAGTATTGTAGTTGTTGAACAAATT
CACCACAACAACGCTCCCTGGTTCCAAGTCCTCTTCGATTCTTCCGTATAGTTTCCTGAAGCTTAGTAGAGCAGCTGCTCGCATCC
ACACAATAAAGTCCTCTTGGTCACTTAGAGGAACTTTAGGATCCAACTTAGCTCCACCAACCAAAGAACCGTTCTGGAAATTGAAA
GGATAAACATCCTTTCTAAACTTGTGCTCACGGTCACTCTTCCAGGCAATGTTGTTCCGGCTCACTTTAGCTTCTTCGCGCTTTCG
CGAGCAAAGGTAAACGTATCATTGAACATACTCCAAGCGATTAACCCACAGGGGACAATGGGGAGACCATTAGATGACTCCTCGGG
TTCACAAGCACTCGTGTGGCTATACTCACGTCCGTGTAACAGTTGTTGATCACTTCTACTCTTTACATACCGGCGGTGGTTCTGAT
AGTAGTTATCAAGCTGGCAGTAGATAAAAATGGGAGCTTTCATATGCTTTTGTACCTTTAAGTAACGAGTACAGTTCTTAGAGATG
GATGAGTCTGTAATGTAAGAGAGTTTGTTGGTTCTATATTCTTCAGGAATACACTCAACATCATACCGGTCAACAATTTCAATAGC
ATCACGAGAAGCACGGAGAGTAACAAAGCCAATGGGAATGAAAACAAAACCCATCAACATAAACACTGTTATAACCGAGGTTGGAG
TTAAGACTGGCTTACAAGCTGGTAGTTTCTGCTGCTTAAACTGATACAATACTTTGGATCGGCTGGAACGTAAGGAGGATGATTGA
GGAGGAGGAGGAGCACGATTCATCGAAGTGTTGGATCCATCCACTTCCATCATTTTATCTTCTCTCCCACTTCAACTAATACATAT
CAAATTACTCCCTTCCGCGATTTGAAATACAAATCGGCGGCGGCGGCTCAGCACGGTGGATCGAAAGGTCGATAGAGAATCCGTGT
GGGCGTTCAATACGCGTAGAGAGAGAGTAGATTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002863424 LEM3 (ligand-effect modulator 3) family protein [Arabidopsis lyrata subsp. lyrata]8671e-090
BAB08260 unnamed protein product [Arabidopsis thaliana]8616e-090
NP_568657 putative ALA-interacting subunit 2 [Arabidopsis thaliana]8616e-090
BAD44111 unknown protein [Arabidopsis thaliana]8616e-090
BAF00516 hypothetical protein [Arabidopsis thaliana]8553e-089

Swiss-Prot top hits (Blast detail)Scoree value
Q67YS6 Putative ALA-interacting subunit 28612e-091
Q9LTW0 ALA-interacting subunit 15163e-051
Q9SLK2 ALA-interacting subunit 35127e-051
Q9SA35 Putative ALA-interacting subunit 44912e-048
Q8L8W0 ALA-interacting subunit 54822e-047

TrEMBL top hits (Blast detail)Scoree value
B9T807 Putative uncharacterized protein6992e-071
B9HZN6 Predicted protein5748e-057
B8AKX4 Putative uncharacterized protein5693e-056
Q10CF0 LEM3 family/CDC50 family protein, expressed5631e-055
B4FVA7 Putative uncharacterized protein5433e-053

Arabidopsis top hits (Blast detail)Scoree value
AT5G46150.2 LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein8612e-092
AT5G46150.1 LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein8612e-092
AT3G12740.1 ALIS1 (ALA-INTERACTING SUBUNIT 1); phospholipid transporter5162e-052
AT1G54320.1 LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein5126e-052
AT1G16360.1 LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein4912e-049

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  100%

Unigene MembersMember information