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Information for unigene UN38725
| FASTA Sequence |
| Unigene ID: UN38725 | Length: 1456 |
SSR | | ATGACAGTCTCAAGAACGTGGAACATAGACAACAATGTAGCAACAACAACAACAACAACAAAAGAAAAACCATTAACAAGAAGATT
TTACAGGAAACAAAAAATAATAATAATAATAATAATAATGGGAACTTGGAAGAAGAAGAGACCAAATATTGAAACTTTTCTTCAAT
GCTTCTCTATAGCTCTAAGACCTCATTTACCCTTTTCGCATTCCAACTTCTTCCAACCGTTTCCAAGTGGCTTCACGTTTGGCCTT
GGTCTCACCTTCCTTTGATTCATCTTCTTTGAACTTAGCGAGGCATTCCTTGAACAGCTCAGGGTCCAGGTCTTGGAATATCTTCC
TCACGTTTAGCGTCAAGCTATGAACAGCCTGGTTCCAATGTTTCTGTGCGTTTCTCTCCAACGCAGGGAATATAATTGGGAGAATG
ACTTTGCGGCTCTGCATTATCAGATTCTCTATGTGATTGTTGTTCCATAAGAATAAAGCTCTCTCTGCAACCTGAAAATGCAGACT
GTTCAAACACCGAGCTATCTGGCGAAACAGCGGCACCATACACCGTTGGAACTCCGGAGGCTGTGTCGCTTCAAGCACTTCCTCCA
ACTCATTCAGAAACATGACTTCTTTAGAACTATTCGTCACGGGCCAGTACTTGAGCAGCCCTCTTATAACCGTATCAGCGAGTTTG
CAATCGTTCTCCACAAACTGCGTGATGCAATAAGACAGTTGCTGGTGATACATCTGCAAGCACTTGGGTTTGTGGAGCGGTATCAA
AACCCGAACCAGAAACACTTTGTGCTCTTCTTTCAAAGGAAGAGCGAAACCGTTGATTATACTTCCCAAGATTTCAAGAAACTCGG
CGATGCCGTTGTGTTTCTCTGTCTCGAAGACAAACCTGTAGAAGATGTTGTTTATTGACTTCCTGATGAAAGGACGGTGGACCATG
AATTTGCCGTAGATCCGGTGGAGGATTGTTTTGAGGCAGTCTCTCTCTCTAGGATCCTCGGAGTCGGACAAGTCTAGTAGCCTCAG
GACGAAGGATTGGTCTATGTATCTTTTGGCCAGTTTGGTGTCAGTCTCAGGAGAAGCAACGAACCTCAGGAAAAGCTCGTAGACGA
GCTGCAAGTGAGGCCAGGCGAGATCCATCGAAGGCTCTTCCTCCTCGAGGTCTAAAGCGTCGATGATGATGATGATGATGATGATG
ATGATGATGATGATGATGTTCGTTCTTTGAAGACTTTTTGTTGTTGGGAAGCTTACTTAGAATCTGTTTCCACATCCTTTAACACC
AACCACAACTTAGATTCTCTTCATCATCTGGAAAAAAAAATCGAGAAATTTTTTTATCTTCTTCTTCGTTTAACGCAGAACAAATC
TAAACCAAAAAGACAAGACCTTTCTTGGGGATTATCGAGGGTCCAGATGAGAAAGAAGAAAAAGCGATTACAACGATGAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_189231 protein phosphatase 2A regulatory subunit B' eta [Arabidopsis thaliana] | 1665 | 4e-183 |
| XP_002875297 hypothetical protein ARALYDRAFT_904782 [Arabidopsis lyrata subsp. lyrata] | 1652 | 1e-181 |
| NP_172803 protein phosphatase 2 (formerly 2A), regulatory subunit B' [Arabidopsis thaliana] | 1567 | 8e-172 |
| AAM61625 B regulatory subunit of protein phosphatase 2A, putative [Arabidopsis thaliana] | 1567 | 8e-172 |
| XP_002890006 hypothetical protein ARALYDRAFT_471504 [Arabidopsis lyrata subsp. lyrata] | 1566 | 1e-171 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LU89 Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' eta isoform | 1665 | 2e-184 |
| Q8LF36 Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform | 1567 | 4e-173 |
| Q8RW96 Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform | 1375 | 7e-151 |
| Q9LVE2 Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' zeta isoform | 1334 | 4e-146 |
| O04376 Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform | 1287 | 1e-140 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9DH07 AT3G26020 protein | 1665 | 2e-183 |
| Q0V836 At1g13460 | 1567 | 6e-172 |
| B9RMK5 Protein phosphatase 2a, regulatory subunit, putative | 1474 | 3e-161 |
| A5BUF9 Putative uncharacterized protein | 1470 | 1e-160 |
| B9HTC8 Predicted protein | 1455 | 6e-159 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G26020.1 serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative | 1665 | 1e-185 |
| AT3G26020.2 serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative | 1665 | 1e-185 |
| AT1G13460.1 serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative | 1567 | 3e-174 |
| AT1G13460.2 serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative | 1567 | 3e-174 |
| AT4G15415.2 ATB' GAMMA; poly(U) binding / protein phosphatase type 2A regulator | 1375 | 6e-152 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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