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Information for unigene UN38730

FASTA Sequence
Unigene ID: UN38730Length: 1050 SSR 
GCTTAATACATAAGCTTCACAAGTTCAGGAAATATCACACTCCAAATATAAAAACTACAGAATAACTCACAATCAAAACAAGAAAA
AAAAAGAAAAAGAAACATCAACATTAGAACTGCAATCAAAGATCAAGATCAAATGTTCTTGTTCTGTAAACAACAATATGTACGTA
TTGCAGATTTCTCCGTGTTTATTCGGACCGCACTCTATCCAATCTATCAACGCTCTTCCTTCCTCTCTCAATCTCATGATTATTCT
GATGATGATGATGATGACTATAGTGGTCAACGCTCTTCCTCGCCTTGTCATGAAGGTCAACGCTCCTCCTCGAACGGTCCAAATGC
TGCTCGAAAGTGATTCTCAGCTTACTCTTCTTGGACTGACCCTTTGGAGGTTTCTCTTTCTCCCTTCTATCAACGCTCTGTCTTGG
CTTCTCTCTTCTATCAACGCTCTGCCTCGGCATCTCGACATCGCTGCTCTGGTTTTCCGATTGGTAGCATGTGCTCTTCCTAGAGG
AGAGAGACCTCTCCACGGTTGTGATGAACTTCTTGAGGTGTTTGATGTATTCAGGGTACTGTTCTAGATCACAGTGGTTACCACCT
TCGAGCCAAAGCGGTTCGTACTTGTCTTTAGAGAGTTCCCATAACTGTTTTCCGTGGGAACAGTCAACAACCTCATCACTAGTTCC
ATGAATGACAAGAACAGGGAAATTCACAAGTGGGATCTTGTCGATATTCTTGTAGATGTCGAACCAGTATGTCTTCTTAACAGGAT
ACATTACTCTAAGACCTGAAAGAATAGGGCTATGGAGAACAACAGCTCTTAACTGAGGTAACCTTGCAGCGAGATCTAACGTAGGT
CCACTTCCTACGGATTGGCCATAAAGGATCACGTCTTCCTGTTTTGCTCCATACGTCTCTTCAAGACATTTGTAAGCAGCTTCAAT
ATCAGCATATGTATGATGCTCACTCGGCTTTCCAGTAGATTGTCCATACCCTGAGTAATCGTACCCCATAAGATTAACCTTGAGAT
GGATGCTCAATTCGATGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002873663 hypothetical protein ARALYDRAFT_488279 [Arabidopsis lyrata subsp. lyrata]13562e-147
NP_196943 alpha/beta-hydrolasefamily protein [Arabidopsis thaliana]13462e-146
XP_002269274 PREDICTED: hypothetical protein [Vitis vinifera]10756e-115
NP_186818 alpha/beta-hydrolase domain-containing protein [Arabidopsis thaliana]10542e-112
XP_002884265 hypothetical protein ARALYDRAFT_477346 [Arabidopsis lyrata subsp. lyrata]10415e-111

Swiss-Prot top hits (Blast detail)Scoree value
Q7ZVZ7 Abhydrolase domain-containing protein FAM108C14865e-048
Q5ZJX1 Abhydrolase domain-containing protein FAM108C14831e-047
A5PKD9 Abhydrolase domain-containing protein FAM108C14803e-047
Q6PCB6 Abhydrolase domain-containing protein FAM108C14803e-047
Q8VCV1 Abhydrolase domain-containing protein FAM108C14803e-047

TrEMBL top hits (Blast detail)Scoree value
Q9LY90 Putative uncharacterized protein At5g1439013462e-146
Q9S7U7 At3g0169010541e-112
B9SLT8 Protein bem46, putative10361e-110
B9GIM7 Predicted protein10324e-110
B9I3J3 Predicted protein10101e-107

Arabidopsis top hits (Blast detail)Scoree value
AT5G14390.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01690.1); Has 2904 Blast hits to 2898 proteins in 507 species: Archae - 0; Bacteria - 766; Metazoa - 578; Fungi - 129; Plants - 154; Viruses - 6; Other Eukaryotes - 1271 (source: NCBI BLink).13655e-151
AT3G01690.1 EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G14390.1); Has 2954 Blast hits to 2948 proteins in 496 species: Archae - 2; Bacteria - 741; Metazoa - 618; Fungi - 134; Plants - 170; Viruses - 6; Other Eukaryotes - 1283 (source: NCBI BLink).10546e-115
AT4G24760.1 unknown protein9212e-099
AT3G30380.1 INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01690.1); Has 3127 Blast hits to 3124 proteins in 513 species: Archae - 3; Bacteria - 775; Metazoa - 627; Fungi - 135; Plants - 158; Viruses - 6; Other Eukaryotes - 1423 (source: NCBI BLink).8101e-086
AT3G30380.2 INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01690.1).8101e-086

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  100%

Unigene MembersMember information