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Information for unigene UN38850

FASTA Sequence
Unigene ID: UN38850Length: 1124 SSR 
GCTCAGGAACTTTAGTATTGAAATGAGAGATAGAAACATACAAATATATAATTCATTTTCTTTTTGTACAATTCTCATAACATCAT
CTCTCCTCTATAAGTAAATTGTACCAAGAACAGTAGTAAATTGTACCAAGAACAGTGATCTACACCCAAAAGGTCCATAATGACTT
GAGAACAAAGCACGAGCATGCCCATGTATGATTGATACTTTGCTTGGCATTTTCCTCTGTTCTTTTGTCTTTTTCATAGACAATAA
TTAAATTGTTCAAATAATGATGATAAGAATCAAGTCTTGACGCTTACGCTCGGCGACTTCTGGTCTGGAGCTCTAGGTGCAGTAGG
TGGTGGTGCACATTGGTTTTTACTTTTCTTAGAACCCGAAGTACAAGAAGAAGAAGAAGAAGAAGAAGCAGGGTTACCAATTGATT
TTGCTCGCATATGCGAACGATGACTATCAGGTGTGGAAGAAGACGAAGAAGTAGAGAGCAAAGGACCTGATCTAGATCGGTTTCTC
CTTTTCTTCCTCTCTTCTTCTGAAAGCTCTCCTTTATTAACTACCCGCCTCACTTTTGTCTCGTTGAAGCGCGGTGGTAACACACA
GTTACAGAGAGCCCCTAAGCGAGCGAGTCGGTTGACCCATCTAGGGATTGGTTTCTGAGTAAGTTTAACACAAACTTCATTGCAAA
AATGGTTGCAGTTCCTTGAGATGAGATTGTACTTGTTTCCTCGATACTCTTCAGCTAGTTTCTCCATAAAGACTCTGACTTCTTTA
GCAGCCATGTCTGTTTTCCCAACAAGAATCGATTTCCTAAACGTGAAACCAGGACACTTCTTTGGCTCCACTTCAAAGATGCCTGT
GCTTGGAGACTCATGTGCTCCAAATGCATATTCAACTCCATGAACTTCAACACCAGAATGAAAGACACCGAGTCCGAGCCAGTAAC
CATAAGCATTCATAGGAGTTAGATCGTAGACATTCAGGTAAACCGGAAGCAAACCGGTTTTCTCCTTCCGCCCAGCAGAACCCTTC
CAGCACAACATCTCTCTCCGCTTCAATACATCACCGATCCGGGAGGAACCAGAGATTTCGGAGGAGAGGGCAAACGAACTGAAACC
GGTTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002878832 hypothetical protein ARALYDRAFT_481377 [Arabidopsis lyrata subsp. lyrata]10093e-107
NP_565588 PPPDE putative thiol peptidase-like protein [Arabidopsis thaliana]9942e-105
XP_002869301 predicted protein [Arabidopsis lyrata subsp. lyrata]8103e-084
AAL38722 unknown protein [Arabidopsis thaliana]7853e-081
NP_194926 uncharacterized protein [Arabidopsis thaliana]7782e-080

Swiss-Prot top hits (Blast detail)Scoree value
Q93VG8 UPF0326 protein At4g174865385e-054
Q5ZIV7 PPPDE peptidase domain-containing protein 13182e-028
A3QRX8 PPPDE peptidase domain-containing protein 13145e-028
Q6DC39 PPPDE peptidase domain-containing protein 13136e-028
Q9BSY9 PPPDE peptidase domain-containing protein 13136e-028

TrEMBL top hits (Blast detail)Scoree value
O81728 Expressed protein9941e-105
Q8VZ51 Putative uncharacterized protein At4g319807852e-081
O49393 Putative uncharacterized protein AT4g319807781e-080
B9RNY3 Putative uncharacterized protein7143e-073
Q6NQ19 At5g251707045e-072

Arabidopsis top hits (Blast detail)Scoree value
AT2G25190.1 unknown protein9946e-108
AT4G31980.1 unknown protein7787e-083
AT5G25170.1 unknown protein7043e-074
AT1G80690.1 unknown protein6353e-066
AT1G47740.1 unknown protein5555e-057

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
101  33%
 
121  33%
 
111  33%

Unigene MembersMember information