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Information for unigene UN38887

FASTA Sequence
Unigene ID: UN38887Length: 911 SSR 
TTTCTGATTTTCTCTCTCTCTCTCTCTCTCTCGCATAAACACGATATCCAAATCTAGGGCTTTTTTTCATTGTTGATCCTTCAGAG
AAACTCATACGTCTGTTGAATTGATAAGATGTCTTCATCCGTTCATCAGAGAAACTCCCATCGGCACGCTGGAAACACGTTGAAGA
GACCGTTCGACAGTCCCGGTGGTTACGGCGGAAGAATCGGAGGTTTCCAAGAGGAGGAGCGAAGCCGTTACGCGCCGCCGTCTCAG
AAACGACCCAGATACCAGACGCAACCGCAATTCCAATCGGGGACTCCTCCTCTGTATAATCGCCGTCATCAACATGATAGTAACTT
GTCTAGGGTTTCTAATTACGGTGATGTGATCAATTCTAATTCGAGTAATATCTCTTCTTTTGCTCATAGTAATTCGCAATCTAACG
CTGATTATCAGAAACCGTATGGTTATGGAAACCCTAATCCCCAATCGGTTCCGCTTCCTTTACCTTATCGTAAACTTGATGGTTTC
GATTCGTTACCGGAATGGGTTCCCAATCTCGCACCTAACACAAACCGTGAGATAACCGGGGTCCGGTTTAACGCTAACCAAGTTTC
TCAACCACCTGTGTTTACGAATTTGCCAAATTCAATGCCTTTGACTCATTCAAACGTTGTTTCTGTTGTGTCACAATCATTATTAC
CACAGCAACCTATCGTGAGCAAAGAATTGGCTGATTTGCTTAGCGTTCTTAACAATAAAGAGAAAGAATGTGATATTGGGCTTGAT
TTTGATAAAATTAATCTTAACGTGCGACGTGAATCTGTTGTTAAGTCTCTTTATTCCGACATGCCGAGGCAATGCTCGTCTTGTGG
TGTTAGATTTCAGTGTCAAGACGAGCACAGCAAGCATATGGATTGGCATGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAA85453 S-locus protein 4 [Brassica rapa]10908e-117
CAC81237 putative PCF11 protein [Brassica napus]5226e-051
NP_199175 Pre-mRNA cleavage complex II [Arabidopsis thaliana]3651e-032
XP_002886970 hypothetical protein ARALYDRAFT_338779 [Arabidopsis lyrata subsp. lyrata]3604e-032
NP_176823 Pre-mRNA cleavage complex II [Arabidopsis thaliana]2206e-016

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9ST17 S-locus protein 410906e-117
Q8VZG9 At1g66500/F28G11_66471e-065
Q8S9G5 Putative PCF11 protein5224e-051
Q9FIX8 At5g436203657e-033
Q9C710 At1g665002204e-016

Arabidopsis top hits (Blast detail)Scoree value
AT1G66500.1 zinc finger (C2H2-type) family protein6478e-068
AT5G43620.1 S-locus protein-related6281e-065
AT4G04885.1 PCFS4 (PCF11P-SIMILAR PROTEIN 4); zinc ion binding2042e-016

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
216  100%

Unigene MembersMember information